| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2318 |
|---|
| Symbol | |
|---|
| ID | 5421109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 2589059 |
|---|
| End bp | 2591584 |
|---|
| Gene Length | 2526 bp |
|---|
| Protein Length | 841 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640881572 |
|---|
| Product | carbohydrate-binding family V/XII protein |
|---|
| Protein accession | YP_001417218 |
|---|
| Protein GI | 154246260 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGAC TCTGGACCGG CGTCTCGGCC GCCGTCCTCT CCGCCGCCCT GCTCTGGAGC
ACGAGCGGCC AGGCCCAGCC CGCACCGGCG TCCCAGGGCC AGGATGCAGC CGGCCAGCAG
GCGCCCCTAG CGTGGCCGCG GGACTTTCCT CTCCCCGGCG ATCAGCTGCT CCAGCTCTAC
CAGCCCCAGA TCGACAGCTG GACCGGCGAT GTGATGTCCG GCCGCGCGGC AGTGGCCATC
GGCCCCAAGT CCGGCACGCC CACCTACGGC ATGGTGCGAT TCTCGGCCCG CGTCGCCGTC
GACAAGCCGG CCGGCCTCGT CCACCTCGCC ACCATCTCCA TCGAAGGGGT GGAGGTGCCC
ACCGAGCCGG CCAAGGCCTC CCTCATCCGC TCCACGCTTC AGTCGCGCCT GCCGGCCAAC
GGCATGACCG TGCCGCTCGA CCAGTTGCAG GCGAGCTACG CGGTGAACCA GGAACTGGCG
AAGCTCAAGT CCCAGCCGGT GGACAACACC CCGCCCCAGA TCCTGTTCGC CACCACCACC
ACCGTGCTGG TGCCCGTGGC TGGCACGCCG GTGCTGCGGC CCATCTCCGG CGCGCCCACC
TTCCAGCGCG TGGCCAACAC CCGCCCGCTG CTGCTGCTTG ACGAGGCCGG CACCTATCAT
CTGGAGGCGG GCGGCCACTG GTATGAGAGC CCCAGCCTCA CCGGCACCTG GATCCTGACG
CCGCAGATTT CGGATGCGCT CTCCGCCGCC GCCAAGGCCG CGACCCAGGA GCAGGCCGCC
GACCCGCTGC TCGACGCCAA GGGCAAGCCC ATCAATCCGG CCCCCGCCAT CCTCGTCGCC
ACCCAGCCGG CGGAACTGAT CCAGTCCAAC GGCCCGCCGC AGATGCTGCC GGTGGCCGGC
ACCAACCTGC TGTCCATGAA CAATGCCGAC CACGCGGTGT TCATGGAGAC CACCTCCAAC
ACCTATTACA TCCTGCTCTC CGGCCGCTGG TTCCGCGCGC CCGACCTCAA GGGGCCCTGG
GCCTTCGTGG CCAGCGATGC GCTGCCGAAG GATTTCGCGA AGATCTCGCC CAATGATCCC
AAGGCCAACG TGCTGGTCTC GGTGGCCGGC ACGCCGCAGG CCAAGGAGGC GGTGATCGCC
GCCACCATCC CGCAGACCGC CACCGTGAAG CGGGACGTGC CCCTGAAGGT GGCCTTCGAT
GGGGCGCCGC GCTTCGAGCC CATCCCCGGC ACCGGCCTCC ACTACGCCAT CAACACCCCG
ACGCCGGTGA TCCAGCTCGA TACCGAGCGC TATTATGCGG TGAACAACGG CATCTGGTTC
GTCGCCGAGA CCGCCACCGG CCCGTGGCGC GTGGCCGACG TGGTGCCGGA CGTGATCTAC
ACGATCCCGG TCTCCTCGCC GCTCCATTAC GTCACCTATG TGCGGATCTA TGCCTCCACC
CCGGAAGCGG TGGTGGTGGG CTATACGCCG GGCTACATGG GCGTTGTCGT CGCGCCGGGC
GGCACCGTGG TCTACGGCAC CGGCTACACC TGCCCGGGCT ATGTGGGCAC CTACTGGTTC
TCCTGCCCGG TCACCTATGG CGTCGGCGCC GGCTTCGCCC TCGGCGTGGC GGACGGCTTT
GCCTTCGGCT TCGCCGCCGG CTGGCCCTGG GGCGCGGCGG TGACGCCCTA TTGGGGTCCG
TACTGGCACC CCTACGGCCC CTATCCCTAT GGTCCTTATG GCCCTTGGGG TGGCCACTGG
GGCTATACCA ACATCAACCA GACCAATCTC TATGGCCGCT GGGGCGGCGC CGCCACGGTG
AACCACGCCT GGGGCACCAC CTGGAACGGC ACCGAATGGT CCGGCCGCGA CTGGCACGGC
ACCACCGCGG GCGGCACCGG CTTCACCGGC CGCTCGGCCG CCGCGTTCAA TCCCTATACG
GGCAACTACG CCGCCGGCGC CGAGAATGCC CGCTACAATC CCACCACCGG CGCCCGGGGC
GAATCCCGCG CCGGGGTGGA AGGCAACGCC TATACGGGCA ATGCCGCCGC AGGCCGCGAA
TCGGCGGGCT TCAACCCCAC AACCGGCACC GGCCACGCCT CCCAGACCGC TGTTACCGAC
CATGACGGCA AGGTGAGCGT GGACAGCCGG GGGGTCGCCG GCAACGTGAA GACCGGCAAC
GCGGTCGCCT GGAACAACGG CCACGTGGCC GTGGACCATG ACGGCAACGT CTACCAGCAC
AGCGACACCG GCTGGGCCAA GAACACCGGC TCGGGCTGGC AGAACGTGGA CCGCACCGCC
GACACCAGCC GCCTCGACGC GGAAGAGCAT GCCCGTTCCG TGAGCCAGCA GCGGGTGTCG
AGCTACGGCG GCGACCACTA CGGCGGTGAA GGCTACGGCG GCGGCGAACG CTTCGGTGGC
GGCTTCGAGG GCGGCGAGCG TTATGGCTCG GGCGGCTTCG ACCGGGGCTT CGGCGGATTC
GGCGGCGGCG ACCGCTTCGG TGGTGGAGGC TTCCGGGGCG GCTTCGGCGG CGGCTTCCGT
CGCTGA
|
|---|
| Protein sequence | MTRLWTGVSA AVLSAALLWS TSGQAQPAPA SQGQDAAGQQ APLAWPRDFP LPGDQLLQLY
QPQIDSWTGD VMSGRAAVAI GPKSGTPTYG MVRFSARVAV DKPAGLVHLA TISIEGVEVP
TEPAKASLIR STLQSRLPAN GMTVPLDQLQ ASYAVNQELA KLKSQPVDNT PPQILFATTT
TVLVPVAGTP VLRPISGAPT FQRVANTRPL LLLDEAGTYH LEAGGHWYES PSLTGTWILT
PQISDALSAA AKAATQEQAA DPLLDAKGKP INPAPAILVA TQPAELIQSN GPPQMLPVAG
TNLLSMNNAD HAVFMETTSN TYYILLSGRW FRAPDLKGPW AFVASDALPK DFAKISPNDP
KANVLVSVAG TPQAKEAVIA ATIPQTATVK RDVPLKVAFD GAPRFEPIPG TGLHYAINTP
TPVIQLDTER YYAVNNGIWF VAETATGPWR VADVVPDVIY TIPVSSPLHY VTYVRIYAST
PEAVVVGYTP GYMGVVVAPG GTVVYGTGYT CPGYVGTYWF SCPVTYGVGA GFALGVADGF
AFGFAAGWPW GAAVTPYWGP YWHPYGPYPY GPYGPWGGHW GYTNINQTNL YGRWGGAATV
NHAWGTTWNG TEWSGRDWHG TTAGGTGFTG RSAAAFNPYT GNYAAGAENA RYNPTTGARG
ESRAGVEGNA YTGNAAAGRE SAGFNPTTGT GHASQTAVTD HDGKVSVDSR GVAGNVKTGN
AVAWNNGHVA VDHDGNVYQH SDTGWAKNTG SGWQNVDRTA DTSRLDAEEH ARSVSQQRVS
SYGGDHYGGE GYGGGERFGG GFEGGERYGS GGFDRGFGGF GGGDRFGGGG FRGGFGGGFR
R
|
|---|
| |