| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2279 |
|---|
| Symbol | |
|---|
| ID | 5420869 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 2540844 |
|---|
| End bp | 2541260 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640881532 |
|---|
| Product | biopolymer transport protein ExbD/TolR |
|---|
| Protein accession | YP_001417179 |
|---|
| Protein GI | 154246221 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0848] Biopolymer transport protein |
|---|
| TIGRFAM ID | [TIGR02804] TonB system transport protein ExbD, group 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.435564 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGAGA AGCCGTTCGA GACCATGAAC GTGATCCCGT TCGTGGACAT CATGCTGGTG
CTGCTGACCA TGGTGCTGAC CACGGCGAGC TTCATCGCGG TGGGCCGGAT CCCGGTGAGC
CTGGCGCAGG CCGCGCCCAT GAAGGTGGAG CAACAGAAGG ACACCATGAT CGAGATCACG
GCGGACGGCA CCCTGCACCT GGAGGGCGTC GCGCTGTCGG TGGAGGAGCT GAAGGCCCGG
CTCGGCGTGC TGCCGAAGGA CACCTCCATC CTGATCCGGG CCGACAAGGC CGTGGCCTTC
CAGAGCTTCG TGGACGTGGC CGACGTGCTG AAGACCCTGG CCTTCACCAA GGTCGGAGTG
CAGACCAAAG GCATCGCCGC GGGTGCGGGA ACCGCCCCGG AGGGAACGCT ACCATGA
|
|---|
| Protein sequence | MDEKPFETMN VIPFVDIMLV LLTMVLTTAS FIAVGRIPVS LAQAAPMKVE QQKDTMIEIT
ADGTLHLEGV ALSVEELKAR LGVLPKDTSI LIRADKAVAF QSFVDVADVL KTLAFTKVGV
QTKGIAAGAG TAPEGTLP
|
|---|
| |