| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2277 |
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| Symbol | |
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| ID | 5420867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 2537028 |
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| End bp | 2539970 |
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| Gene Length | 2943 bp |
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| Protein Length | 980 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640881530 |
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| Product | outer membrane autotransporter |
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| Protein accession | YP_001417177 |
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| Protein GI | 154246219 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.356388 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGTTC AATCGCTTTT TCACGGCGTG TCGCGCACGC GCGCACTCGG GCTCGTCGCC
ATCGGCCTGG GCGCCGGTAG CCTTGCGCAG ACCGTGCTGG CCGATCCCCT GCCGTCTTCA
TCGACGACCT ATGAGACGTT GAATTACGGG ACGACCGGGA CGTTCCTCAC CGGCATTCGC
GGCGACAATA TCGTCGGCAA TTACACGATC CCCGGCACCA CCGAGACCGG CGGCCTCTAC
TACAACATGA CCAGCCACAC CTGGTCGCCG ATGCCGGAGG CCACCGACAA CGGCGCAAAC
TATCCCGGCG CCATCGGCTC GTCGCCCTAT GGGCCGAGCT TCGGAACCCC CGGCGGCATC
CTGCGCGTGG TGGGCAGCTA CCAGACCGAA GCTTCGGCTC CGTATGACCT CAGCTATCTT
TACGATGCCG CCGCAGCGCC GGGGCAGACG CTGACACCGC TCGCCTATCC GGGCACCGAC
ACCCTCTACA CCATTGCCCA CAGCAACTTC GGCAACCAGG TGGTCGGCGA CTACGACACC
CGGCTCGCGA CCGGTAACGC CTTCATCTAC AATATCGACA CAAAAACCTA TATTACCAAC
AATATACCAG GCGCCGTCAG CACTACCGCC TATGGCATCT ACGGCGACAA GATCGCCGGC
GGCTATGGCG AAGTCGAGGT CGGCGGCGGG CTCCACGCCG AGCACGGCTA CATCTACGAC
CAGACCACCG GCACCTATGA AACCTACGAT CACCCCGGTG CGGTCGCGAC TCATTTCGAG
GGTATCACCG GGGCCGGCCG CTCCGGCGAG TACAACCTCG TCACCAACTG GGTGTCGGCG
GACGGCGTGG TGCATCCCGC AGTCATGCAC ATCGATGCCC TCGGTGTCGT GACCTGGTAC
GAGATCGACA TTCCCGGGGC CGTCGTGTCG TCCAACTCGG CCTATGGCGA CAACGTCGTC
GGCATCTATG TCTCGACCGA GGGCGGCACG ACCACCATAA ACGGGTTCAT CGCCACCATT
CCGGGCATGT ACAACCCGAT CCGCAATATC GGAACGCTGA ACTTCGCGGA CGACAATGCC
GCCGCCCTGT CGGGCCTGAA GGGTGACGAC ATCATCAACA GCGGCACCAT CCATGTCACC
GGCAACGGCG GCATCGGCAT GCGTGGCGAG ACCTATGGCG TGCTGACCAA CAAGGGCACC
ATCACCGCCT CCGGCATCGC CGGGGCAGCG GTGGAGTTGC ATGGCACCTA CGGCACCTTC
CTGAACTACG GCATCCTGCA GACCACGGTC GAGGCCGACG CCCTGCGCAC GGGCCCGGAC
AGCCACGGGA CCGTGATCGT GAACACGGGC ATCATCGATG GCCGGCTGGC CGCGACGGCC
GGGACGGACA AGCGGTTCGA GAACAGCGGC TGGCTCGGCG TGAGCGGCAC CGGCCCGACG
ATCACCCACC TCTTCAGCGG CATCTTCGTG CAGACCGCGG CGGGCACCTA CGCAGCGCGC
GTTACGGATG AGGGCAGCGA CTTTCTGGAG GTGACGGGCA CCATACGGCT CTCCGGCACG
CTGCAGGCAG CCTTCCTCAA CACGAGCTTC GCCCCGACCA CGACGCTCAT GGTCGCGACC
GACGGCATCA CCGGCACCTT CGACCAGGTG GTCACCCCCG GCCTGCCGGC GCTGTTCGAC
GCGAGCGTGG CCTATGCGCC AACCGCCGTC ACCATGACCG TCGCCGCCGA TCTCGCCGGC
AAAGCAGGGA ACACGCGGAA CCAGCGCGCG GTCGGCGGTG CCATCGATCG CGTCATCAAC
ACCACGACCG ACGGCCTGCT GACGACCCTT CCCACCGCGC TCAGCCCGCT CTACGGCCTC
ACCGCGGCGG AACTGCCCGG CGCGCTCACC GCCCTCTCCG GCGAGGCCTA TGCCAGCGCG
CAGACGGTTC TGCTGGGCGA CAGCGCGTAC AGCCGCGACG CCCTGCTGGG ACGCATGCGC
CAGGGCTCCT ATGCCGGCCA GGGTGGCCCG ACGGCCGCGC TCGGCTTCGG CGGGCCGGCG
CTCGCCTATG CCGCCCCGAC CACGCCCGGC GTACCGTTCC CGACCAAGGC GCAGCCCTCC
GCCGAGCCCG CGTTCAACGG CACCATCTGG GCGCAGGCGT TCGGAGGATG GAGCGCCTAT
GGCGGCGGCC GCGACACCGC CGATGTCGAT GCCAGCATCG GCGGGCTCAT CTCCGGCGCC
GATGTCAAGG TCGAGAACTG GATGCTCGGC GCGGCGGTCG GCTACACGCA CTCCAGTGCG
CAAATGGATG CGCTGGCGAG CCAGTCTGAC GCCGACAGCA TGCTGGTGGG GCTCTATGCG
GGCGCCAGTT CCGGGCCATG GAAGCTGCGC CTTGCCGCCA GCTACGCCTT CAACCAGATC
GACGCTTCGC GCACCATCGC CTATCCCGGA TACTTCCAGC GAGCGGGTGC AGACTATTCC
GGCGGTACCG GACAGGTGTT CGCGGAGGTC GGCTACGGCT TCGCGGTCCA GCACCTGGCG
CTGGAGCCCT TCGCAGGCCT TGCCTACGTC CTTCTGAACA CCGACGGCTT CACCGAGACG
GGCGCCACGG CCGGCCTGAC CGGTGCGTCG AGCACCATGG GGGTCGGCTA CTCCTCGCTC
GGCCTCAGGC TGGCGACCAC CGTGGAGCTG TCACGCGGCA TGGCGCTGGA GCCCAATGCC
TCGGTCGCCT GGCAATATGC CTTCGGCGAC CTCACCCCCG ATGCCCAACT CGCCTTCCTC
AGCGTCCCGA GCGCGAACTT CACCGTCGCT GGCGTGCCGC TGGCGCAGAA CACCGCGCTG
GTGAAGGCGG GCGCCGACCT GCGCATCGGT CAGCAGGTCC GCCTCGGCAT GGCCTATGTC
GGCCAGTTCG CGGACAGCGT GACGGTGAAT GCCGTCCAGG CCAACCTGGC GTGGCGGTTC
TAG
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| Protein sequence | MTVQSLFHGV SRTRALGLVA IGLGAGSLAQ TVLADPLPSS STTYETLNYG TTGTFLTGIR
GDNIVGNYTI PGTTETGGLY YNMTSHTWSP MPEATDNGAN YPGAIGSSPY GPSFGTPGGI
LRVVGSYQTE ASAPYDLSYL YDAAAAPGQT LTPLAYPGTD TLYTIAHSNF GNQVVGDYDT
RLATGNAFIY NIDTKTYITN NIPGAVSTTA YGIYGDKIAG GYGEVEVGGG LHAEHGYIYD
QTTGTYETYD HPGAVATHFE GITGAGRSGE YNLVTNWVSA DGVVHPAVMH IDALGVVTWY
EIDIPGAVVS SNSAYGDNVV GIYVSTEGGT TTINGFIATI PGMYNPIRNI GTLNFADDNA
AALSGLKGDD IINSGTIHVT GNGGIGMRGE TYGVLTNKGT ITASGIAGAA VELHGTYGTF
LNYGILQTTV EADALRTGPD SHGTVIVNTG IIDGRLAATA GTDKRFENSG WLGVSGTGPT
ITHLFSGIFV QTAAGTYAAR VTDEGSDFLE VTGTIRLSGT LQAAFLNTSF APTTTLMVAT
DGITGTFDQV VTPGLPALFD ASVAYAPTAV TMTVAADLAG KAGNTRNQRA VGGAIDRVIN
TTTDGLLTTL PTALSPLYGL TAAELPGALT ALSGEAYASA QTVLLGDSAY SRDALLGRMR
QGSYAGQGGP TAALGFGGPA LAYAAPTTPG VPFPTKAQPS AEPAFNGTIW AQAFGGWSAY
GGGRDTADVD ASIGGLISGA DVKVENWMLG AAVGYTHSSA QMDALASQSD ADSMLVGLYA
GASSGPWKLR LAASYAFNQI DASRTIAYPG YFQRAGADYS GGTGQVFAEV GYGFAVQHLA
LEPFAGLAYV LLNTDGFTET GATAGLTGAS STMGVGYSSL GLRLATTVEL SRGMALEPNA
SVAWQYAFGD LTPDAQLAFL SVPSANFTVA GVPLAQNTAL VKAGADLRIG QQVRLGMAYV
GQFADSVTVN AVQANLAWRF
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