| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2273 |
|---|
| Symbol | |
|---|
| ID | 5421306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 2531614 |
|---|
| End bp | 2532936 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640881526 |
|---|
| Product | general substrate transporter |
|---|
| Protein accession | YP_001417173 |
|---|
| Protein GI | 154246215 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.979998 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.381458 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGGGC CTTCGGCAAC CGCCGTTCCA TCCACCGTGA CCGCAGAGGT GCCTGCGATC
AGATCGAGAA CCGCAGCAAT CCTGCGCTCG ACCAGCGGAA ACTTTCTTGA GCAGTTCGAC
TTTTTTCTTT TTGGTTTCTA CGCGACGTCG ATTTCCAAGG CGTTCTTCCC GACCGGAAAT
GAAGTCACGG AACTGCTCCT CACCTTCACG ACCTTCTGGC TCGGCGCGCT GATGCGGCCG
GTGGGCGCGA TCGTGCTCGG CTCCTATCTC GATCATATTG GCCGCCGCAA GGGACTGATC
GTGACGCTCG GCATCATGGC CGCCGGCACG GTGCTCATCG CAGTGTGCCC CACCTACGCA
CAGATCGGCA TCGCCGCGCC GCTCATCGTG CTCTTCGGTC GCCTGTTGCA GGGCTTCTCG
GCGGGCGTGG AGCTGGGCGG CGTCTCGATC TACCTGTTCG AGATCGCGAC GCCCGGCAAC
AAGGGCTTCT ACACCTCGTT CCAGTCGGCC AGCCAGCAGG TTGCCATCTT CTTTGCGGCC
ATCATCGGCT TCTCGCTGAG CCAGCTGATG CCGTCCGAGA CCATCTCCGC GTGGGGCTGG
CGCATTCCCT TCTTCATCGG CTGCGCGATC ATCCCCTTCA TCTTCTTCAT CCGCCGGACG
CTTGAGGAGA CCCCCGAGTT CCTCAAGCAG AAGAAGCACC CGACCCAGAG CGAAGTCTTC
GCCGCGATGC TCACCAACTG GCGGATCGTG CTGCTCGGCA TGATGCTGAC CGCCATGACC
ACGGTGACCT TCTACTTCAT CACCGTGTAC ACCCCGACCT TCGGCAAGAA CGTGCTGAAG
CTGTCCATCA CCGACAGTCT TCTGGTCACG CTGCTGGTAG CGACAACCAA CTTCATCTGG
CTGCCCATCG GCGGCGCGAT CTCGGACCGC GTGGGTCGCC GTCCGGTGCT GCTGACCATC
GCCATCCTGG CGCTGGCGAC GGCCTATCCC GCCCTCGCGT GGCTGGTGGT GGAGCCGACC
TTCAACAAGA TGCTGATGGT GGAGCTGTGG TTCTCGCTGT GCTTCGGCGT CTATAACGGC
GCCATGGTGG CGGCCTTGTC CGAAGAGGTG CCCGCCCATG TGCGCACCAC CTGCTTCTCG
CTCGCCTTCG CCCTCGCCGC AGCCCTGTTC GGCACGTTCA CGCCCCTGGT CTCCACCTGG
CTGATCGACA TGACGGGGAA CCGCGCGGCA CCGGGCTTCT GGCTCATGGC CGCGGCCGCC
TCGGGCCTGA TCGCGACCAT CCTCATCTAT CGCGGACGGG GCGCGGCCCC CGCGCGGAGT
TGA
|
|---|
| Protein sequence | MVGPSATAVP STVTAEVPAI RSRTAAILRS TSGNFLEQFD FFLFGFYATS ISKAFFPTGN
EVTELLLTFT TFWLGALMRP VGAIVLGSYL DHIGRRKGLI VTLGIMAAGT VLIAVCPTYA
QIGIAAPLIV LFGRLLQGFS AGVELGGVSI YLFEIATPGN KGFYTSFQSA SQQVAIFFAA
IIGFSLSQLM PSETISAWGW RIPFFIGCAI IPFIFFIRRT LEETPEFLKQ KKHPTQSEVF
AAMLTNWRIV LLGMMLTAMT TVTFYFITVY TPTFGKNVLK LSITDSLLVT LLVATTNFIW
LPIGGAISDR VGRRPVLLTI AILALATAYP ALAWLVVEPT FNKMLMVELW FSLCFGVYNG
AMVAALSEEV PAHVRTTCFS LAFALAAALF GTFTPLVSTW LIDMTGNRAA PGFWLMAAAA
SGLIATILIY RGRGAAPARS
|
|---|
| |