Gene Xaut_2248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_2248 
Symbol 
ID5422302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp2508645 
End bp2510552 
Gene Length1908 bp 
Protein Length635 aa 
Translation table11 
GC content58% 
IMG OID640881501 
Producthypothetical protein 
Protein accessionYP_001417148 
Protein GI154246190 
COG category[S] Function unknown 
COG ID[COG3472] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0310793 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0143369 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCGCG TGTCGTTCGA CAGCACGAAG AAGCCGCTTG AAGAGCTTTT GAAACAGGCC 
CGCGCGGGAA CGCTCCAGCT CCCGGACTTT CAGCGTAGTT GGGTGTGGCG CGACGACAGC
CTCCGCGCCG TCCTCGCCTC CGTCTCCCGA TCCTTCCCGG TCGGGACCTT AATGACCCTT
CAGACCGGAG GGGACGTGAA CTTCAAGCCG CGCCCGATCG AAGGGACGCC CCCGAACGCC
GCGGAGATTG CCCCTGATGC TCTTGTGCTC GACGGCCAAC AGCGCATCAC TTCCCTTTAT
CAGCTCACGA TGCGCCAAGA GGTGGTAGTC ACCCGAGACG TGAAGAAGCA GCCAATCCGT
CGGTGGTACT ACATCGACAT GCAGGCCGCC CTAGACCCAC AGGTGGATCG TGAGGCCGCC
ATCATCGGTG TGCGGGAAGA TCGGACAGAA CTGAGAGGCT TTGAGGTTGT TCGTGACCTT
TCCACACAAG AGCACGAATT CGAGCAATGC ATGTTCCCCA CGAACAAGAT TTTTGACTCC
GACCAATGGC AGATGGGATT CGCGAACCAT TGGAAATTTG ACCAAGAAAA GATGAAGCTT
TGGTTCGCTT TCGCAAATGA GGTACTCGCT GCGTTCAAGC AATACCAAAT GCCGGTGATT
GCGCTGGACA AGTCGACCTC GCGGGAGGCG GTATGCTTGG TATTTGAGAA GGTCAATACG
GGCGGCGAGA AGCTCGATGC ATTCGAGCTC CTCACAGCGA TTTATGCCGC CAGCGAATTC
GATTTACGCA CGGATTGGCG CGGCGGTGGA GAGGCGGGCG ACGGTCGGGC GAAAAGGATC
GCATCGGGCA TACCCTTCCC AAAGAACGCC CTCACTCAGC TCCAAGCGAC AGACTTCCTT
CAGGCGGTAT CACTGCTTCA CAGCCTGGAG CGGCGCCGCG CGCACCAAGG GTCGAGCGAG
CCACCGGCCG TCACCGCAAA ACGAGACGAT CTGCTCCGCA TCCCGCTCGA TCGCTACAAG
GAACTTGCCC CTCGGATCGA AGCGGGTTTT GTGGCTGCCG GCCGGCTCCT CTTCTCCCAA
CACGTCTACG GCGTGAAGGA TTTGCCCTAT CAGTCCCAGC TTGTGCCCTT TGCCGTTGTC
TTCGCCGATC TCGCGGAAGA GGCCGACAAG CACGACGTGA AGCAAAAGCT CCTGCGCTGG
TGGTGGTGCG GCGTATTTGG TGAACTCTAC GGCTCGGCCA TCGAAAGCCG ATTTGCGCGG
GACGTTCAAG AGGTCCCCGC TTGGGTGAAT GGCGGAGAGG AGCCAAGCAC GATTCGCGAC
GCAACCTTCC GGTCCGAGCG GCTGGACACC ATGACATCGC GGCTATCTGC GGCCTACAAG
GGCGTTCACG TCCTGCTCAT GCAGGCCGGC GCCAAGGATT TTCGCAGCGG ACAGGCCTTC
AGTCATATGG TGTATTTCGG CGAAAGCGTG GACATTCACC ACGTATTCCC CCGCGCATGG
TGCGAAGCTA AGAAAATAAA GCGTACCATA TACGATAATA TAATTAATAA AACTCCACTA
TTCTATAAAT CAAACCGTAC CATTGGTGGC TCCGCACCAT CGATTTACCT CGGGCGCTTG
CTTAAAGAAA AAGCAATTGA AACCATCGTG GAACAGGATG CAGTGATCTC GACGCACGGC
ATCAACCCAA CACTCCTCCG AATGGATAAC TTTGAAGCTT TTTGCGCAGA GCGTCGGGAG
GCGCTCCTCA AGCTTATCGA AGGTGCCACG GGTAAAGCGG CCTATAGGGG CGAGGCCGCC
CCGACAGAAG GTGGGCCCGT TGGGCTCGCC GAGTCGGACG AGGACCAAGA GGATGAGATT
GTGGAGGATG CGGGCGAGCT GGCCGCAAAC GAGATGGAGC CGGCCTAG
 
Protein sequence
MTRVSFDSTK KPLEELLKQA RAGTLQLPDF QRSWVWRDDS LRAVLASVSR SFPVGTLMTL 
QTGGDVNFKP RPIEGTPPNA AEIAPDALVL DGQQRITSLY QLTMRQEVVV TRDVKKQPIR
RWYYIDMQAA LDPQVDREAA IIGVREDRTE LRGFEVVRDL STQEHEFEQC MFPTNKIFDS
DQWQMGFANH WKFDQEKMKL WFAFANEVLA AFKQYQMPVI ALDKSTSREA VCLVFEKVNT
GGEKLDAFEL LTAIYAASEF DLRTDWRGGG EAGDGRAKRI ASGIPFPKNA LTQLQATDFL
QAVSLLHSLE RRRAHQGSSE PPAVTAKRDD LLRIPLDRYK ELAPRIEAGF VAAGRLLFSQ
HVYGVKDLPY QSQLVPFAVV FADLAEEADK HDVKQKLLRW WWCGVFGELY GSAIESRFAR
DVQEVPAWVN GGEEPSTIRD ATFRSERLDT MTSRLSAAYK GVHVLLMQAG AKDFRSGQAF
SHMVYFGESV DIHHVFPRAW CEAKKIKRTI YDNIINKTPL FYKSNRTIGG SAPSIYLGRL
LKEKAIETIV EQDAVISTHG INPTLLRMDN FEAFCAERRE ALLKLIEGAT GKAAYRGEAA
PTEGGPVGLA ESDEDQEDEI VEDAGELAAN EMEPA