Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_2244 |
Symbol | |
ID | 5424043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 2504430 |
End bp | 2506034 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640881497 |
Product | nuclease |
Protein accession | YP_001417144 |
Protein GI | 154246186 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000544674 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0168792 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTTCA AAACAGTTCG CCTGGACAAT AGCTCATATC GACGAGGCGT GGTGCTTGGC CTAACCATGG CGGAGATCAT GCTGCTTCTC GTCTTTTGCC TCCTTCTCGG CTTCGCAGCC CTTACGGCAA GGGATCGGGA CAGGATCACG AAGCTGGCTC AGGAGCGCGA TGCCGCCCGT AGTTCGGTGA TGGAGGAGTC CGCCCTGAAA CAGCTCGTGG CGGATCTGCG AAATATTGCA GGCAACAAGG ACCAGGTATC GGATGCCTGG GAAACGCTTG TGCGCTCGCG CGATGCTATG CAGAGGCTGG AACAGGCTGG GATTTCGGTC GACAATGCCA TTCACTCGGC GCGGGCAATT ACCGCGTTCG CCAAAGCCGG ACTGGAGAGT GGAGATCCCG ACGAACTCGT CCGTGACGTC AAACTTGCCC GGCAGATCAA GGGAGCGCTG AACGACCGAA ACCTAAGCAT TCCGAGCCCT ACGGAAATGG CGAGCGCTGT GCAGAACGCT GCCAATGGAA AGGGCGAGCA TGATTGGCCG CCTATCGTGA ATCTGAGCGA GGCGGATGGC TTTTTCTTCA AAGTGGGATC AGCTCAGCCG AACCCGGATT TCGTGAAGAG CATCCATTCG TCGATCGCCC CACGTTTGAT CGATTATATC AAGGAATACA ACGTCGATAT TGTTGAAGTG ATCGGTCATA CGGATGAGCA GCCTATGGCT CCGCGTCCGT CAAATCTCGA TGGCGCGCTG CTGACGGTGC TGGCCAGCCG ATCCGACATA TCGACGGCTA TGCCGGCGGA CAATGCTGGG CTTGGCCTCG CCCGCGCGGT GGCGGTAATG CAGATCCTGA AAGGCGACAG CCGTCTCGCC GGCACGACAA TCCTTCCCTT CTCGGGAGGA CAGCTTATCC AGCCGGGCGA TCGTCTGACA GCCGGAAGCG GGGGTGATGT CAAGGAGAGG CGGCGCATAG AAATCCGGCT ACGTCGCTCA AATCCGATGC CTGATGTTAG CGGCCACGCT ATTGCAGCGT CATCACCGGC CGCACCGCAA GACGCAACCA AAGGTAACGT CAAAGCCGGC AATCCGGCCG CTCCACCGTT GGCTGAGACC AGGGCGGAGA CTGCCGCCTC CCTGGTGCCG GCCCATCAGA TCGCTTCGGC GCAACCTGCT CCTCCATTAC CGGAATCCCT TGTCGGTCGC GCCACCGTTA TCGACGGCGA TACGATCAGT ATCGGCGATC AAAGGATAAG GCTTTTTGGC ATAGATGCCC CGGAAGCCCA GCAAACTTGC GTTGACGGCA AAGGGCAGGA CTATCCTTGC GGTAGGAGCG CTGCGCTTGC TCTTAACGAG TTTCTTTCGG CGGCTCGCCC TACGCGTTGT GATCGTAAAG GCATCGACCG ATACGGAAGA ATCGTTGCAA GCTGCTATCG TGCTTCTGGC GAGGATATCG CGTCATGGCT GGTCCGGTCT GGCTTCGCAT TAGACTGGCA GTTATATAGC CATGGCCTGT ACGCGAAAGA ACAGCAAAGC GCGCGCACAA ATCGGGCCGG GCTCTGGCAG GGCCAATTCA CTCTTCCATG GGAGTGGCGG GCGAGCGGGA GATAA
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Protein sequence | MTFKTVRLDN SSYRRGVVLG LTMAEIMLLL VFCLLLGFAA LTARDRDRIT KLAQERDAAR SSVMEESALK QLVADLRNIA GNKDQVSDAW ETLVRSRDAM QRLEQAGISV DNAIHSARAI TAFAKAGLES GDPDELVRDV KLARQIKGAL NDRNLSIPSP TEMASAVQNA ANGKGEHDWP PIVNLSEADG FFFKVGSAQP NPDFVKSIHS SIAPRLIDYI KEYNVDIVEV IGHTDEQPMA PRPSNLDGAL LTVLASRSDI STAMPADNAG LGLARAVAVM QILKGDSRLA GTTILPFSGG QLIQPGDRLT AGSGGDVKER RRIEIRLRRS NPMPDVSGHA IAASSPAAPQ DATKGNVKAG NPAAPPLAET RAETAASLVP AHQIASAQPA PPLPESLVGR ATVIDGDTIS IGDQRIRLFG IDAPEAQQTC VDGKGQDYPC GRSAALALNE FLSAARPTRC DRKGIDRYGR IVASCYRASG EDIASWLVRS GFALDWQLYS HGLYAKEQQS ARTNRAGLWQ GQFTLPWEWR ASGR
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