| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2223 |
|---|
| Symbol | |
|---|
| ID | 5425213 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 2483192 |
|---|
| End bp | 2484397 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640881476 |
|---|
| Product | glycine oxidase ThiO |
|---|
| Protein accession | YP_001417124 |
|---|
| Protein GI | 154246166 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.210224 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCA GCTTGTCGAC CTTCATGTCC AGTTCTTCTT CAGCCGGCTC GGCAACTCCC
GGCGCTGCAT CTGCGCGCCC GCGCGTCGCC ATCGCGGGCG GCGGGGTCAT CGGCCTCGCT
CTTGCTTGGC GGCTTGCGCA GGCGGGCTGC CCGGTGGAGG TCTTCGAGGC GGGGGAAACC
GGCCAGGGCG CGAGCCGTGC CGCCGCCGGC ATGCTGGCCG CCTGCGCCGA GGCGGAGCCG
GGGGAGGAGG TTCTCCTCGC CCTCAATCGC GCCAGCCAGG TCCTTTGGCC GGCGTTCGCC
GCCGATCTGG AGCAGGCGGC GGGTTCGTCG GTGGACCTGC GCACCGAAGG CACCCTCACC
ATCGCCCTCA CCGCCGACGA TCTCGCGCGG CTGCGGCACC TTTATGCCCT CCAGCAGTCC
CTTGGCCTGC CGGTGGAATG GCTCACGGCG GCGCAGGTGC GGCGGCGCGA GCCCTATCTC
TCGCCCAAGC TGGCCGGCGG CATCCTCACC CTTGAGGACC ATCAGGTGGA CAACCGCAAG
GTGGCCGCCG CGCTCAAGGT GGCGGCGCTG AAGGCCGGCG TGAATATCCA GGAGCACACG
CCCGTCGCGC GGGTGGAGAC GGCCGGCGGC CGCGTCACCG GCCTGGTGGC GGGTGATACG
CTCCATGCGG CCGACGTGGT GGTGCTCGCC GCCGGGGCCT GGAGCCGGGG CATCGACATC
ACCCCCGCCG CGCCGCTTCC GGTGCGGCCC ATCAAGGGCC AGATGCTGGC GCTGCGCATG
GACCCCGCCG CGCCCATCCT CTCCCATGTG CTGTGGGCGC CGGGGGCCTA TCTCGTGCCG
CGCCACGACG GCCGCCTCAT CATCGGTGCC ACCACCGAGG AGAAGGGCTT CGACACCGAT
CTCACCGCCG GCGGGCAGCT GGCGCTGCTC ACCAATGCGT GGCGCGCCCT GCCGACGCTC
GAGGAGCTGA CCATCCTCGA GCAATGGGTC GGCTTCCGCC CCGGCAGCCG GGACGATGCC
CCCATCCTCG GTCCGAGCGA GGAGGTGGAC GGCCTGATCT ACGCCACCGG CCACCACCGC
AACGGCATCC TGCTTCTGCC GGTGACCACG CAGGTGATCG CCGATTATGT CCTGTCGGGC
CGCATGGCGG ACGTGGCGGC GCCCTTTGGC GCGGCGCGCT TTGCCCCGCG CGCGGCGGCG
GAGTGA
|
|---|
| Protein sequence | MSASLSTFMS SSSSAGSATP GAASARPRVA IAGGGVIGLA LAWRLAQAGC PVEVFEAGET
GQGASRAAAG MLAACAEAEP GEEVLLALNR ASQVLWPAFA ADLEQAAGSS VDLRTEGTLT
IALTADDLAR LRHLYALQQS LGLPVEWLTA AQVRRREPYL SPKLAGGILT LEDHQVDNRK
VAAALKVAAL KAGVNIQEHT PVARVETAGG RVTGLVAGDT LHAADVVVLA AGAWSRGIDI
TPAAPLPVRP IKGQMLALRM DPAAPILSHV LWAPGAYLVP RHDGRLIIGA TTEEKGFDTD
LTAGGQLALL TNAWRALPTL EELTILEQWV GFRPGSRDDA PILGPSEEVD GLIYATGHHR
NGILLLPVTT QVIADYVLSG RMADVAAPFG AARFAPRAAA E
|
|---|
| |