Gene Xaut_2176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_2176 
Symbol 
ID5424651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp2437768 
End bp2438394 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content70% 
IMG OID640881429 
Producthydrogenase expression/formation protein 
Protein accessionYP_001417077 
Protein GI154246119 
COG category[C] Energy production and conversion 
COG ID[COG0680] Ni,Fe-hydrogenase maturation factor 
TIGRFAM ID[TIGR00072] hydrogenase maturation protease
[TIGR00140] hydrogenase expression/formation protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0123485 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.201269 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGACG ATCGGCAAGT TGCGCGCATT CTGGTGCTCG GCATCGGCAA CATCTTGTGG 
GCTGACGAGG GCTTCGGCGT CCGCGTGCTG GAAGCGCTCG ACGCTTCCCA TGTCTTTCCC
GACACCGTCA CCCTGCTCGA TGGCGGCACC CAGGGCCTCT ATCTGCTCCC CTATCTGGAA
GAGGCGGACG GCGTCGTCAT CGTGGATGCG GTGGATTACG GCCTCGTTCC GGGCACGCTC
CATATCCTCG CCGATGGTGA GGTGCCCGCC GTGCTCGCCG CCCGCAAGGT GAGCCTGCAC
CAGACCGGCT TCCAGGAAAT CCTCGGCCTG CTCGCTTTGC GCGGCAAGAC GCCCGCGCGC
ATCGTGCTGG TGGGCGTGCA GCCCGAGCTG CTGGACGATT ACGGGGGCGG CCTCACCGCC
ACCATCGCCG CGCAGGTGGA GCCGGCGGCG CGCAAGGTGC TCGACATCCT GAAGGACGAG
TTCGGCGTGA TGCCCGCGCC CCGCGCGGGA GAGGGCAGCC TCGTCACCGC CGCCGTCGGC
CGGCAGTCCT ACGAAAGCGA GCGCCCGAGC GCGGAGGCGG CGTGCCGCAT CGGCGATCCC
CGCGTCCTCG CCACCTCCCG GAGCTGA
 
Protein sequence
MDDDRQVARI LVLGIGNILW ADEGFGVRVL EALDASHVFP DTVTLLDGGT QGLYLLPYLE 
EADGVVIVDA VDYGLVPGTL HILADGEVPA VLAARKVSLH QTGFQEILGL LALRGKTPAR
IVLVGVQPEL LDDYGGGLTA TIAAQVEPAA RKVLDILKDE FGVMPAPRAG EGSLVTAAVG
RQSYESERPS AEAACRIGDP RVLATSRS