Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_2175 |
Symbol | |
ID | 5424650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 2436621 |
End bp | 2437373 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640881428 |
Product | Ni/Fe-hydrogenase, b-type cytochrome subunit |
Protein accession | YP_001417076 |
Protein GI | 154246118 |
COG category | [C] Energy production and conversion |
COG ID | [COG1969] Ni,Fe-hydrogenase I cytochrome b subunit |
TIGRFAM ID | [TIGR02125] Ni/Fe-hydrogenase, b-type cytochrome subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000847396 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.136379 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGA CCTCACTGTC CGGCGCCGCG CCTCCGGCGG CCCCTGTTTC CCCGGTTGCC AAGGCGGCGG CCGGTGGAAA GAAGCTGACC ACCGTCTATG TGTACGAGGC GCCGGTGCGC CTCTGGCACT GGGTGAATGC GCTTTCCATC GTGGTGCTGT GCATCACCGG CTACTTCATC GGCTCGCCGT TCCCGACCCT GTCGGGGGAG GCGAGTTCCC ACTACCTCAT GGGCACCATC CGCTTCGTGC ACTTCTCGGC GGGCTATATC CTCGCCGTGG GCTTCCTCGG GCGGATCATC TGGGCCTTCT TCGGCAACAA GTATTCCCGC GAGCTGTTCA CCTTCCCGTT CTGGCGCAAG AGCTTCTGGC GGGGCTTCTT CGTCGAGATC AAGTGGTATG CGTTCCTCAA GCCCCGCCCG CTGAAGTTCG TGGGGCACAA TCCGCTGGCC CAGGTCTTCA TGTTTTTCGT GATGGTGCTG GGCCTGACCT TCATGATCGT CACCGGCTTT GCCCTCTATT CGGAGGGGGC CGGAGCAGGC TCATGGCAGG ACCGGCTGTT CGGCTGGGTG CTGCCGCTGC TGGGCGGGTC CATGCAGGTG CACACGCTGC ATCACCTGGG CATGTGGATG ATTATCCTGT TCGTGATCAT CCATGTCTAT TCGGTGATCC GCGAGGACAT CATGTCCCGC CAGACCATGG TCTCGGCCAT CACCAACGGC CACCGCACCT TCCGGGACGA CGACCCGGAG TGA
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Protein sequence | MSETSLSGAA PPAAPVSPVA KAAAGGKKLT TVYVYEAPVR LWHWVNALSI VVLCITGYFI GSPFPTLSGE ASSHYLMGTI RFVHFSAGYI LAVGFLGRII WAFFGNKYSR ELFTFPFWRK SFWRGFFVEI KWYAFLKPRP LKFVGHNPLA QVFMFFVMVL GLTFMIVTGF ALYSEGAGAG SWQDRLFGWV LPLLGGSMQV HTLHHLGMWM IILFVIIHVY SVIREDIMSR QTMVSAITNG HRTFRDDDPE
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