Gene Xaut_2175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_2175 
Symbol 
ID5424650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp2436621 
End bp2437373 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content63% 
IMG OID640881428 
ProductNi/Fe-hydrogenase, b-type cytochrome subunit 
Protein accessionYP_001417076 
Protein GI154246118 
COG category[C] Energy production and conversion 
COG ID[COG1969] Ni,Fe-hydrogenase I cytochrome b subunit 
TIGRFAM ID[TIGR02125] Ni/Fe-hydrogenase, b-type cytochrome subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000847396 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.136379 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGA CCTCACTGTC CGGCGCCGCG CCTCCGGCGG CCCCTGTTTC CCCGGTTGCC 
AAGGCGGCGG CCGGTGGAAA GAAGCTGACC ACCGTCTATG TGTACGAGGC GCCGGTGCGC
CTCTGGCACT GGGTGAATGC GCTTTCCATC GTGGTGCTGT GCATCACCGG CTACTTCATC
GGCTCGCCGT TCCCGACCCT GTCGGGGGAG GCGAGTTCCC ACTACCTCAT GGGCACCATC
CGCTTCGTGC ACTTCTCGGC GGGCTATATC CTCGCCGTGG GCTTCCTCGG GCGGATCATC
TGGGCCTTCT TCGGCAACAA GTATTCCCGC GAGCTGTTCA CCTTCCCGTT CTGGCGCAAG
AGCTTCTGGC GGGGCTTCTT CGTCGAGATC AAGTGGTATG CGTTCCTCAA GCCCCGCCCG
CTGAAGTTCG TGGGGCACAA TCCGCTGGCC CAGGTCTTCA TGTTTTTCGT GATGGTGCTG
GGCCTGACCT TCATGATCGT CACCGGCTTT GCCCTCTATT CGGAGGGGGC CGGAGCAGGC
TCATGGCAGG ACCGGCTGTT CGGCTGGGTG CTGCCGCTGC TGGGCGGGTC CATGCAGGTG
CACACGCTGC ATCACCTGGG CATGTGGATG ATTATCCTGT TCGTGATCAT CCATGTCTAT
TCGGTGATCC GCGAGGACAT CATGTCCCGC CAGACCATGG TCTCGGCCAT CACCAACGGC
CACCGCACCT TCCGGGACGA CGACCCGGAG TGA
 
Protein sequence
MSETSLSGAA PPAAPVSPVA KAAAGGKKLT TVYVYEAPVR LWHWVNALSI VVLCITGYFI 
GSPFPTLSGE ASSHYLMGTI RFVHFSAGYI LAVGFLGRII WAFFGNKYSR ELFTFPFWRK
SFWRGFFVEI KWYAFLKPRP LKFVGHNPLA QVFMFFVMVL GLTFMIVTGF ALYSEGAGAG
SWQDRLFGWV LPLLGGSMQV HTLHHLGMWM IILFVIIHVY SVIREDIMSR QTMVSAITNG
HRTFRDDDPE