| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2157 |
|---|
| Symbol | |
|---|
| ID | 5423305 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 2418648 |
|---|
| End bp | 2419529 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640881409 |
|---|
| Product | 3-hydroxybutyryl-CoA dehydrogenase |
|---|
| Protein accession | YP_001417058 |
|---|
| Protein GI | 154246100 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.180368 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.128892 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCTCG AGATCAAGAA GGTCGGGGTC ATCGGCGCAG GCCAGATGGG CAACGGCATC
GCGCACGTCT GCGCCCTCGC CGGCTATGAC GTATTCATCC ATGACGCGGA CCCCGACCGC
ATTCGCTCCG GCCTTGCCAC CATCAACGGC AACATGGCCA AGCAGGTCTC CAAAGGCACC
GTGACCGAGG AAGCCCGGCA GGTGGCCCTC GCCCGCATCG GCATGGCCGA GCGCACCGAG
GACTTGGCCG ACTGCGACCT CGTCATCGAA TCGGCCACCG AGAAGGAAGA GGTGAAGCGC
AAGATCTTCA CCGGCCTCTG CCAGGTGCTG CGGCCCGACG CGCTGCTCGC CTCCAACACC
TCGTCCATCT CCATCACGCG CCTCGCCGCC GCCACCGACC GCCCCGAGCG CTTCATCGGC
ATTCACTTCA TGAATCCGGT GCCGCTGATG GAGCTGGTGG AGCTGGTGCG CGGCATCGCC
ACCGACGACG ACACCTTCGA AAGCTCGAAG CAGTTCGTCA CCCGGCTTCA CAAGACCTAT
GCGGTGGCCG AGGACTTCCC GGCTTTCATC GTCAACCGCA TCCTTTTGCC CATGATCAAC
GAGGCCATCT ACACCCTCTA CGAGGGCGTC GGCAGCGTGG ATTCCATCGA CCGGGCCATG
AAGCTCGGCG CGAACCATCC CATGGGACCG CTGCAGCTGG CCGACTTCAT CGGCCTCGAC
ACCTGCCTGG CGGTCATGCA GGTGCTGCAC GAGGGCCTGG CGGACTCCAA GTACCGCCCC
TGTCCGCTGC TGGTGAAATA TGTCGAAGCC GGATGGCTCG GCCGCAAGAC CCAGCGCGGC
TTCTACGATT ATCGCGGCGA GAAGCCGGTC CCGACCCGCT GA
|
|---|
| Protein sequence | MPLEIKKVGV IGAGQMGNGI AHVCALAGYD VFIHDADPDR IRSGLATING NMAKQVSKGT
VTEEARQVAL ARIGMAERTE DLADCDLVIE SATEKEEVKR KIFTGLCQVL RPDALLASNT
SSISITRLAA ATDRPERFIG IHFMNPVPLM ELVELVRGIA TDDDTFESSK QFVTRLHKTY
AVAEDFPAFI VNRILLPMIN EAIYTLYEGV GSVDSIDRAM KLGANHPMGP LQLADFIGLD
TCLAVMQVLH EGLADSKYRP CPLLVKYVEA GWLGRKTQRG FYDYRGEKPV PTR
|
|---|
| |