| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2153 |
|---|
| Symbol | |
|---|
| ID | 5423815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 2414265 |
|---|
| End bp | 2415278 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640881405 |
|---|
| Product | alanine racemase |
|---|
| Protein accession | YP_001417054 |
|---|
| Protein GI | 154246096 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.419726 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0819902 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGCA TCGTCACCAT TCGCACCGTC GCCGAACGCG CCGGCTGCTC CATCGCCACC
GTCAGCCGGG TCATCAACCG CTCGGCCCCC ACCAGCACAG CTGTTGAGGC GCGCGTGCGG
GCCGCCGTCG CTGAACTCGG CTTCCGCCCG AGCGAGATCG GCCGCGCGCT GAAGACCCTG
CGCACCCGGA CGCTGGGCGT GGTCATCCCC AGCCTGACCA ACCCGGTGTT CGCAGCCTCG
GTGGCCGGCA TGCAGTCGGC GGCGCGGGAG CGGCAGCACA CGTTGCTGCT CACCGCCACC
GATTATGAGC CCGGTGCCGA GGCCGAGTTG GTGGAGACGC TGGTCGCCCA GAACGTGGCC
GGCCTCATCC TCACTGTCGC CGATGCCTGC GAGAATGCCA CCCTCGACCT GCTGGAGGCG
GAGGGCATCC CCTACGTGCT GGTCCACAAC GAACCGGCCC GCCCCGGCCG GGCCGCCGTG
TGCGTGGACA ACGCCGGCGC CACCTGCGCC CTCACCGAGA CCATGATCGC GGCCGGCCAC
CGGCGCATCG CCTACCTCGC CGGCCGCTTC GCCACCTCCG ATCGCGCCCG CCGCCGCTTT
GAGGGCTACC GCGCCGCCAT GGAAGCGGCG GGCCTTGAGC CCGAGGGTCC CCTCGAGCTC
GATTATCTCG GCGATGCGCC GAGCCATGCC GAGGCCCTCG CCGGCCTCTT TCGCGCCGGA
GCGCCGCCCA CGGCCGCGCT CTGCTCCAAC GACCTGCTCG CCCTGTCCGT GGTCGGGGCC
CTGCGCACGC TGGGGCTCCG CGTGCCGGAC GACATCTCCG TCGCCGGCTT CGACGGCATT
GCCTTGGGCG GGGCGGTTCA CCCCACCCTC GCCACGGTGG ATACGCCCAC CCGCCTCATG
GGGGAGCACG CGGTGGCGAT GCTCTTCACC ATGATCGAGA CGGGCGCCAC GCCCCGTGTC
GAGCACCTGC CGTTTACGCT CCGCCCCGGC GGAACGCTTG CGTCCAGAGT TTAG
|
|---|
| Protein sequence | MARIVTIRTV AERAGCSIAT VSRVINRSAP TSTAVEARVR AAVAELGFRP SEIGRALKTL
RTRTLGVVIP SLTNPVFAAS VAGMQSAARE RQHTLLLTAT DYEPGAEAEL VETLVAQNVA
GLILTVADAC ENATLDLLEA EGIPYVLVHN EPARPGRAAV CVDNAGATCA LTETMIAAGH
RRIAYLAGRF ATSDRARRRF EGYRAAMEAA GLEPEGPLEL DYLGDAPSHA EALAGLFRAG
APPTAALCSN DLLALSVVGA LRTLGLRVPD DISVAGFDGI ALGGAVHPTL ATVDTPTRLM
GEHAVAMLFT MIETGATPRV EHLPFTLRPG GTLASRV
|
|---|
| |