Gene Xaut_2149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_2149 
Symbol 
ID5423595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp2410416 
End bp2411477 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content72% 
IMG OID640881401 
ProductABC transporter related 
Protein accessionYP_001417050 
Protein GI154246092 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.13609 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.266081 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGGG GCGCCGCCAT CACCGTCTCC GGCTGCGGCA AGACCTTCGC CGACGGCACC 
CGCGCCCTCG CCCCCCTCGA CCTCGATGTG ACGGCAGGCG AGACGCTGGT GCTGCTCGGC
CCCTCCGGCT GCGGCAAGAC CACCCTGCTG CGCCTCATCG CCGGGCTGGA GGCCCCCGAC
GCGGGCGGGC AGATCCGCTT CGACGGTGCG GACGTGACCG CCCTGCCCAT CGAGAAGCGC
AACGTGGGCA TGGTGTTCCA GTCCTATGCC CTGTTTCCCA ACATGAGCGT CATCGACAAT
GTGGCCTACG GACTGCGGGT GCGCGGCATG GCGAAGGCAG CACGCCGCGC GCAGGCGGCC
GGCGTGCTGG AGATGATGCG CATCGGCGCG CTGGCGGAGC GTCGCATCGA CCAGCTCTCC
GGCGGCCAGC GCCAGCGGGT GGCGCTCGCC CGGGCGCTGG CCGTGGAGCC GCGGGTGATC
CTGCTGGACG AGCCGCTCAC CGCGCTGGAC GCCGCCCTGC GCGAGCATCT GCGCGGCGAG
ATCGATGCGC TGCTGAAGCG CCTCGCCATC ACCGCCATCT ATGTCACCCA CGACCAGGCC
GAGGCGCTGG CGCTGGGCGA CCGCATCGTG GTGATGCGCA ACGGCGCCAT CGCCCAGGTG
GGCACCCCGC GCGATGTGTA TTTCCGCCCG GCCGACGATT TCGTGGCCGA TTTCGTGGGC
ATCACCAACC GCCTCGCGGG CACGGTGACG AACGGCCGCT TCGAGACCGC TGCCGGGTTC
GTACCGTTGC CGCCGGATCT TGCGTCCCCG GCGGCCGCCC CGGCCGGGCA AGGCGCGGTG
CGGCTGCTGT TCCGTCCCGA GGCGGCGCGG CTCATCCCAC CCCCGGAAGC CGGGCTGGTG
TTCGAGGTGA TGCAGGTGGA ATTCCAGGGC GCCCGCCAGA AGGTCACCCT CAAGGACCCG
GCCGGCGCGC GCATCCTGGT GGAGGCGCCG GCCGATGGGG TGCTGGCGCC CGGCGCCGCC
GTCGGGCTTA TCCTCGATCC TGCCCGAATC AGCCTCGCCT GA
 
Protein sequence
MNRGAAITVS GCGKTFADGT RALAPLDLDV TAGETLVLLG PSGCGKTTLL RLIAGLEAPD 
AGGQIRFDGA DVTALPIEKR NVGMVFQSYA LFPNMSVIDN VAYGLRVRGM AKAARRAQAA
GVLEMMRIGA LAERRIDQLS GGQRQRVALA RALAVEPRVI LLDEPLTALD AALREHLRGE
IDALLKRLAI TAIYVTHDQA EALALGDRIV VMRNGAIAQV GTPRDVYFRP ADDFVADFVG
ITNRLAGTVT NGRFETAAGF VPLPPDLASP AAAPAGQGAV RLLFRPEAAR LIPPPEAGLV
FEVMQVEFQG ARQKVTLKDP AGARILVEAP ADGVLAPGAA VGLILDPARI SLA