| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2138 |
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| Symbol | |
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| ID | 5424060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 2400530 |
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| End bp | 2401960 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640881390 |
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| Product | homospermidine synthase |
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| Protein accession | YP_001417039 |
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| Protein GI | 154246081 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG5310] Homospermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACT GGCCGGTCCA CGCGAAGATC GACGGCCCCA TCGTGATGAT CGGGTTCGGT
TCCATCGGCC GCGGCACCCT GCCGCTGATC GAGCGCCACT TCGATTTCGA TCTCTCCCGC
ATGGTGGTCA TCGACCCCGT GGCGGACCAC AAGACGCTGC TCGACGCCCG CGGTATCCGC
TTCATCCAGT CCGAAGTCAC CGCCGAGAAT TACCGTGAGC TGCTCACCCC GCTCCTCACC
AACGGTGGCG GCCAGGGCTT CTGCGTGAAT CTCTCGGTGG ACGTGTCGTC CGTGGCGGTG
ATGGAGCTCA CCCGCGAGAT CGGCGCGCTT TACGTGGACA CCGTCATCGA GCCCTGGAAG
GGCTTCTATT TCGACGAGAC CATGGATAAC GCCGCGCGCA CCAACTACGC CCTGCGCGAG
AGCCTGCTGG CCGCGCGCCG GCGCAATCCC GGCGGCACCA CGGCGGTGTC CACCTGTGGC
GCCAACCCGG GCATGGTCTC CTGGTTCGTG AAGCAGGCGC TGCTCAACAT CGCCGCCGAC
ACCGGCCTCG ACCGGCCCGA GCCGGCGAAC CGCGAGGAAT GGGCGCAGCT CGCCCGCGCG
CTCGGGGTGA AGGGCATCCA TATCGCCGAG CGCGACACCC AGCGCGCCCG CGAGCCCAAG
GTCATGGGCG AGTTCTGGAA CACCTGGTCG GTCGAAGGCT TCGTCTCCGA AGGCCTCCAG
CCTGCGGAGC TCGGCTGGGG CACCCATGAG AAGTCCCTGC CGCCGGACGG GCGCACCCAC
GAGGCCGGCT GCGGCGCAGC CATTTACCTG CTCTCGCCCG GTGCCGCCAC CCGCGTGCGC
TCGTGGACCC CGACGCCGAA GGCCCAGTAC GGCTTCCTCG TCACCCACAA CGAGAGCATC
TCCATCGCCG ACTACCTGAC GGTGCGCGAC GGCGACACCG TGCTCTACCG GCCCACCTGT
CACTATGCCT ACCACCCGGC GAACGACGCG GTGCTGTCGC TGCACGAGAT GTTCGGCAAT
GGCGGCCACT TCCAGGAGAA GTGGAAGATC CTCGACGAGC ATGAGATCGT GGACGGCATC
GACGAACTGG GCGTGCTCCT CTACGGCCAC GCCAAGAACG CTTACTGGTT CGGCTCCCAG
CTCTCCATCG AGCAGACGCG CGAGCTTGCG CCCTACCAGA ACGCCACCGG CCTGCAGGTG
ACCTCTGCCG TGCTCGCCGG CATGGTGTGG GCGCTGGAGA ACCCCAACGC GGGCATCGTG
GAAGCCGACG AGATGGACTT CCGCCGCTGC CTTGAGGTGC AACTGCCCTA TCTCGGTCCG
GTGATCGGCA CCTACACGGA CTGGACGCCC CTCACCGGCC GCCAGAAACT GTTCCCCGAG
GACCTGGACC TTGAGGACCC CTGGCAGTTC AAGAACGTCA TCGTGCGCTG A
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| Protein sequence | MSDWPVHAKI DGPIVMIGFG SIGRGTLPLI ERHFDFDLSR MVVIDPVADH KTLLDARGIR
FIQSEVTAEN YRELLTPLLT NGGGQGFCVN LSVDVSSVAV MELTREIGAL YVDTVIEPWK
GFYFDETMDN AARTNYALRE SLLAARRRNP GGTTAVSTCG ANPGMVSWFV KQALLNIAAD
TGLDRPEPAN REEWAQLARA LGVKGIHIAE RDTQRAREPK VMGEFWNTWS VEGFVSEGLQ
PAELGWGTHE KSLPPDGRTH EAGCGAAIYL LSPGAATRVR SWTPTPKAQY GFLVTHNESI
SIADYLTVRD GDTVLYRPTC HYAYHPANDA VLSLHEMFGN GGHFQEKWKI LDEHEIVDGI
DELGVLLYGH AKNAYWFGSQ LSIEQTRELA PYQNATGLQV TSAVLAGMVW ALENPNAGIV
EADEMDFRRC LEVQLPYLGP VIGTYTDWTP LTGRQKLFPE DLDLEDPWQF KNVIVR
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