| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2108 |
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| Symbol | |
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| ID | 5422691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 2368957 |
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| End bp | 2370168 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640881360 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001417009 |
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| Protein GI | 154246051 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.261804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACCT TCACCTACAG GGCCCTCACC CAGGCCGGAC AGATCGTGAG CGGCGAGATC
ACCGCGCCCA CCGAGGCGGA GGTGCGCCGG CGCATCGAGT TCCTCGGCCT CATGCCGGTG
GAGACGATCC CGGCGCGGCC GAAGGGCGAG GGCGGGCGGT TCGGCCTGTC GCTGGGCGGG
CCGAAGGCGG AGGACGTGAC CCTCTTCACC CGCGACCTCG CGCTGCTGTT GAAGGCCGGC
GCGCGGCTCG ACGAGGCGCT GGAGCTGTTG TCCGGCGATG CGGACCTCGG CCGCATGCGG
GCGGTGGTGC GCAAGCTGCG CGCCGACGTG CTCGCCGGCC AGAGCTTCGC CGAGGCGGCG
GCGGGGGAGC CCAAGCTGTT CCCGCCGGTC TATGTGGCGC TGGTGCGGGT GGGCGAGGCC
TCCGGCACCA TGGACCGCAT CCTCGACCTG CTCGCCCAGG AGCGCGCGCG GGCCGAGCAG
CTGCGCCGCA AGCTGATGGA AGCGCTGCAA TATCCCGCCT TCGTGCTGGC GGCGGCGGGC
GGGGTGCTGG TGTTCTTCCT GTTGTTCGTG CTGCCGCAAT TCTCCACCGT GCTGCGCGAC
ATGGGCGCCA AGCTCGATCC GGCGGTGGAA ATGCTGCTGA ACCTGTCGGA TCTTGCCCAG
GCCCATGGCG CCGCGCTGGG GGCGGGGGCC TGCGGTCTGG TGGCCATCGC CTGGCTGGTG
CTGCGCCGGC CGGCTACGCG AACGGCCGTG ATGGGCGCGC TGGCGCGGCT GCCGCTGGTG
CGCACCATTC TCACCTTCCG CCGCTCGGCC GTGTTCTGCC GCAACCTCTC CATCCTGCTG
GGCAACGGCG TGACGCTGAC CAGCGCCCTG CGCATCATCG TGGAGGTGAT GGCGGCAGGC
GACGACGCTT CCGTCTGGGC CGCCACCTCG GACAAGGTGC GCCAGGGCGC GCGGCTGTCG
GATGCGGTGG CGGCCGGCGC GGCGCTGCCG CCCATGGCGG TGCGCATGCT GCGCCTCGGC
GAGGAGACCG GCCAGCTTGC CATGCTGTCG GGCCGCATCG CCGATTTCTA CGAGGAAAAG
CTCCAGCGGT CCCTCGCGAA GGTGGTCGCC ATCATCGGAC CCGCCGCCAT TGTCACCATC
AGCGTCGTCG TCGGCGGCCT GATCGTTTCC GTCATGACCG CGCTTCTGTC GGTCAGCCAA
AGCATCGGAT GA
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| Protein sequence | MATFTYRALT QAGQIVSGEI TAPTEAEVRR RIEFLGLMPV ETIPARPKGE GGRFGLSLGG
PKAEDVTLFT RDLALLLKAG ARLDEALELL SGDADLGRMR AVVRKLRADV LAGQSFAEAA
AGEPKLFPPV YVALVRVGEA SGTMDRILDL LAQERARAEQ LRRKLMEALQ YPAFVLAAAG
GVLVFFLLFV LPQFSTVLRD MGAKLDPAVE MLLNLSDLAQ AHGAALGAGA CGLVAIAWLV
LRRPATRTAV MGALARLPLV RTILTFRRSA VFCRNLSILL GNGVTLTSAL RIIVEVMAAG
DDASVWAATS DKVRQGARLS DAVAAGAALP PMAVRMLRLG EETGQLAMLS GRIADFYEEK
LQRSLAKVVA IIGPAAIVTI SVVVGGLIVS VMTALLSVSQ SIG
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