| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2075 |
|---|
| Symbol | |
|---|
| ID | 5423372 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 2335710 |
|---|
| End bp | 2336369 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640881327 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_001416976 |
|---|
| Protein GI | 154246018 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.280824 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCGT TTTCCACCTG GGACATCGTC TCCAACCTGC TGCTGGCCGC CCGCTGGACC
GTGCTGCTCT CGCTGCTCGC CTTCGTCGGC GGCGGCGTGG TGGGGCTGGT GGTGCTCTAT
GCCCGAATCG CCCGCAAGGC GTGGCTGCGC CGCGCCGCCG GCCTCTACAT CGAGCTGTTC
CAGGGCACGC CTCTTCTGAT GCAGCTGTTC CTGATCTTCT TCGGCCTGCC GCTGCTCGGC
CTCGACGTGT CGCCCTGGGC GGCGGCGTTC GTGTCGCTGA CCCTGTGGAG CTCGGCCTTC
CTCGCCGAGA TCTGGCGCGG CTGCGTCGAA TCGATTCCCA AGGGGCAGTG GGAGGCCTCG
TCCTCCCTCG CCATGAGCTT CGTGGAGCAG CTGCGCTACG TGATCCTGCC CCAGTCCATG
CGCATCGCGG TGCCGCCCAC GGTGGGCTTC TCTGTGCAGG TGGTGAAGGG AACGGCGCTG
ACCTCCATCA TCGGCTTCGT GGAGCTGTCC AAGGCCGCCA CCATCATCAC CAACGCCACG
TTCGAGCCGT TCACGGTCTA CGGCTTCGCG GCGCTGATCT ATTTCGCCCT GTGCTGGCCC
CTGTCGAAGT CGAGCCAGAT CCTGGAGAGG AAGCTGAATG TCGCTCATCA CAATCACTGA
|
|---|
| Protein sequence | MTAFSTWDIV SNLLLAARWT VLLSLLAFVG GGVVGLVVLY ARIARKAWLR RAAGLYIELF
QGTPLLMQLF LIFFGLPLLG LDVSPWAAAF VSLTLWSSAF LAEIWRGCVE SIPKGQWEAS
SSLAMSFVEQ LRYVILPQSM RIAVPPTVGF SVQVVKGTAL TSIIGFVELS KAATIITNAT
FEPFTVYGFA ALIYFALCWP LSKSSQILER KLNVAHHNH
|
|---|
| |