| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2070 |
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| Symbol | |
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| ID | 5423117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 2328913 |
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| End bp | 2330817 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640881322 |
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| Product | pepF/M3 family oligoendopeptidase |
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| Protein accession | YP_001416971 |
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| Protein GI | 154246013 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1164] Oligoendopeptidase F |
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| TIGRFAM ID | [TIGR02290] oligoendopeptidase, pepF/M3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.024965 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.33011 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCACCCAT TCTTCCGTTC GTTCGCTTTG CGCGCGTCCG CCCATCCCGT TCTTTCGGCC
GACTTCGAGA GCGCGTTTGC CGCCGCCCGT CACGCCGCCC CCGCCACCGC CGCAGCGGTA
CAGACCGCCG AGCGCCTGCC CGAATGGAAC CTCACCGACC TCTACCCGGC CATGGATTCG
CCCGAGCTGA AGGCGGACCT GGATAAGGCC GATGTCGCCT GCAAGGCGTT CGAAACCGCC
TTCAAGGGCA AGCTTGCCGC CCTGCTCGCC CTTCCCGACG GCGGCGCGGC GCTGGGCGCG
GCGGTGAAAA GCTACGAGGA GGTGGACGAC CTCTTGGGTC GGATCGCCTC CTACGGCAGC
CTGATCTATG CCGGCGATAC CTCGGACCCG GCCCGCGCCA AGTTCTACGG CGACATTCAG
GAGCGCCTCA CCGACGCCTC CACGCACCTG CTGTTCTTCA CGCTGGAGAT GAACCGGCTG
GACGACGCGG CCCTTGAAGC CGCCATGGCC GATCCTGCGC TCGGCTATTA CCGCCCGTGG
GTGGAGGACC TGCGCAAGGA CAAGCCCTAC CAGCTCGACG ACAAGATCGA GCAACTGTTC
CACGAGAAGT CCAACCCCTC ACGCGGCGCC TGGAGCCGGC TGTTCGACGA GACCATCTCG
TCCCTGCGCT TCACCGTGGA CGGGCAGGAC CTCGCCATCG AGCCCACCCT CAACCTGATG
CAGGACCCGC GGGAAGAGGT GCGCAAGTCC GCCGGGCTGG CGCTGGCCGA CACCTTCGGC
AAGAATTTGC GGCTGTTCAC CCTCATCACC AACACCCTGG CCAAGGACAA GGAAATCTCC
GACCGCTGGC GCGGGTTCGA GGATGTGGCC TCCTCGCGCC ACCTCGCCAA CCGGGTGGAG
AAGGAGGTGG TCGACGCCAT GGTGGAGGCG ATCCGCGTCT CCTTCCCGCG CCTGTCCCAC
CGCTATTACG CGCTGAAGGC CCGCTGGTTC GGCAAGGACC GGCTGGAGTT CTGGGACCGC
AACGCGCCGC TGCCCAAGGT GGAGACCCGC GACATCGGCT GGGGCGAGGC CAAGGACACG
GTGCTGTCCG CCTACGGCGC CTTCTCGCCG AAGATGGCGG ACATCGCCAA GACCTTCTTC
GAGAAGTCCT GGATCGATGC CCCGGTGCGC CCCGGCAAGT CGCCGGGCGC CTTCGCCCAC
CCCACCGTGC CCTCCGCGCA CCCCTATGTG CTGCTGAACT ACCAGGGCAA GCCGCGGGAC
GTGATGACGC TCGCCCATGA GCTGGGCCAC GGCGTGCACC AGGTGCTGGC CGCCCGGCAG
GGCGCGCTGA TGGCGCCGAC CCCGCTGACC CTGGCGGAGA CCGCCTCGGT GTTCGGCGAG
ATGCTCACCT TCCGCCGGCT GCTGGACGGC GCCGAGACCC CACGGGCCCG CAAGATCATG
CTGGCCCAGA AGGTGGAGGA CATGATCAAC ACGGTGGTCC GCCAGACCGC CTTCTATACA
TTCGAGCGCG ATGTCCACAT CGAGCGCCGG CAGGGCGAAC TGACCTCCGA GAAGATCGGC
GAGATCTGGA TGAAGGTGCA GGGCGAGAGC CTCGGCCCGG CGATCCATCT CGGCGCGGGC
TACGAGACGT TCTGGACCTA TATCCCCCAC TTCATCCACT CGCCGTTCTA CGTCTATGCC
TATGCCTTCG GCGACTGCCT CGTGAACTCG CTCTACGCGG TCTACGAAAA TGCGGCCGAC
GGCTTTGCCG ACCGCTATCT GGAGATGCTC TCGGCGGGGG GCACCAAGCA CCATGCCGAG
CTGCTCGCAC CGTTCGGCCT CGATGCCCGC GACCCGGCGT TCTGGCAGAC CGGGCTTTCC
CTCATCGACC GCATGATCTC CGAGCTGGAG AGCATGGAGG GCTGA
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| Protein sequence | MHPFFRSFAL RASAHPVLSA DFESAFAAAR HAAPATAAAV QTAERLPEWN LTDLYPAMDS
PELKADLDKA DVACKAFETA FKGKLAALLA LPDGGAALGA AVKSYEEVDD LLGRIASYGS
LIYAGDTSDP ARAKFYGDIQ ERLTDASTHL LFFTLEMNRL DDAALEAAMA DPALGYYRPW
VEDLRKDKPY QLDDKIEQLF HEKSNPSRGA WSRLFDETIS SLRFTVDGQD LAIEPTLNLM
QDPREEVRKS AGLALADTFG KNLRLFTLIT NTLAKDKEIS DRWRGFEDVA SSRHLANRVE
KEVVDAMVEA IRVSFPRLSH RYYALKARWF GKDRLEFWDR NAPLPKVETR DIGWGEAKDT
VLSAYGAFSP KMADIAKTFF EKSWIDAPVR PGKSPGAFAH PTVPSAHPYV LLNYQGKPRD
VMTLAHELGH GVHQVLAARQ GALMAPTPLT LAETASVFGE MLTFRRLLDG AETPRARKIM
LAQKVEDMIN TVVRQTAFYT FERDVHIERR QGELTSEKIG EIWMKVQGES LGPAIHLGAG
YETFWTYIPH FIHSPFYVYA YAFGDCLVNS LYAVYENAAD GFADRYLEML SAGGTKHHAE
LLAPFGLDAR DPAFWQTGLS LIDRMISELE SMEG
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