| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2069 |
|---|
| Symbol | |
|---|
| ID | 5422916 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 2327927 |
|---|
| End bp | 2328691 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640881321 |
|---|
| Product | two component Fis family transcriptional regulator |
|---|
| Protein accession | YP_001416970 |
|---|
| Protein GI | 154246012 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00351311 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.27354 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTGC CCCTGCTTCT GGTCGAAGAT GACCCTGTCG AGGCGCGCCG CCTCTCGTCG
GCCCTCGCCG GCCTTGGCTA CGAGGTGACG CTGGCCGAGG ATGGCGACGC GGCGCTGGAC
CAGCTGGCCG CCGGCACCTT CGACGTGGTG CTGTTGGATC TGGTGGTGCC GGGCCTCGAC
GGCATGGGCG TGCTCGACGC CATGGCGGCG CGCGGACTTG CGGTTCCGGT GGTGGTGCAG
GTGACGGCGG CCGGGCTCGA TGCCGCCTCG GGCGCCATTC GCGCCGGCGC GCGGGATTTC
GTGGTGAAGC CGGCCGGGGC GCTGCGCCTG CAGGTGGCCC TTGCCAATGC GGTGGCCCTC
GGCCGCGCCG CCCCGCCGAC GACCCGGCCC GCGCGGACCC AGCCAGACAA CGCACAGCCG
GACAATGTGG TGGCCTTCAC CCCCGCGTCC GGCCCATTCG TCGTTGCGCC GCCCCCGCTC
CGCGACAGCG GGACGGAATC CCCCCTGCCC CCGCTTCTGC GGACCGAAAG CCTGGCTTAC
GCCCGCCTCG ACGCTGCCGG CCATGCCCGC CGGCTGGAGC AGATCGAGGC CGAGGCCATC
CGCTTTGCCT GCCACCTCTA TGGCGGGCGC ATGGCGGAGG TGGCCCGCCG CCTCGGCATC
GGCCGCTCCA CCCTCTACCG CAAGCTCGCT GAACTGGATG CCGATACGGT AGGCGGCAAC
CGCGATGTGG AACCAGATGC CGCGCGGTTT GTTGCCGCTG AGTGA
|
|---|
| Protein sequence | MTLPLLLVED DPVEARRLSS ALAGLGYEVT LAEDGDAALD QLAAGTFDVV LLDLVVPGLD
GMGVLDAMAA RGLAVPVVVQ VTAAGLDAAS GAIRAGARDF VVKPAGALRL QVALANAVAL
GRAAPPTTRP ARTQPDNAQP DNVVAFTPAS GPFVVAPPPL RDSGTESPLP PLLRTESLAY
ARLDAAGHAR RLEQIEAEAI RFACHLYGGR MAEVARRLGI GRSTLYRKLA ELDADTVGGN
RDVEPDAARF VAAE
|
|---|
| |