Gene Xaut_2002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_2002 
Symbol 
ID5421395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp2258940 
End bp2259293 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content68% 
IMG OID640881254 
Productanti-sigma-factor antagonist 
Protein accessionYP_001416903 
Protein GI154245945 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.249184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATTG AAACCCACGC CCTCGGCCCG GAACAGGTTC TGATCGTGCT CGACGGCCGG 
CTCGACATCG AAGGCACGGC GCAGATCGAG GTGGCGTTCA GCGCCGCGTC GAGCCACGCC
AAGGCGACCC TGGTGGACCT GTCGGCGATG CCCTACGTCG CCTCCATCGG CATCCGCCTG
TTCATCAGCA ATGCCAAGGC CCTGACCCGC CGGGGCGGAC GCCTGATCCT GTTCGGCGCG
GAGCCGACGG TAGAGCGGAT CCTTCTCACC ACGGGCCTTG GCGATCTCGC GACCGTGGTC
GCCACCCGGG CGGATGCTGA CGCCGCGCTC GCCACCCTCG CCACAGCCTC CTGA
 
Protein sequence
MNIETHALGP EQVLIVLDGR LDIEGTAQIE VAFSAASSHA KATLVDLSAM PYVASIGIRL 
FISNAKALTR RGGRLILFGA EPTVERILLT TGLGDLATVV ATRADADAAL ATLATAS