Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_2001 |
Symbol | |
ID | 5421394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | - |
Start bp | 2258002 |
End bp | 2258757 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640881253 |
Product | low temperature requirement A |
Protein accession | YP_001416902 |
Protein GI | 154245944 |
COG category | [S] Function unknown |
COG ID | [COG4292] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.23218 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGAC TGGGAGCGCG GCAATTCCTT CTGCGCAAGG CGCCGGAGCA CGGCCATCAC GCGGTGACCT TCATCGAGCT GTTCTTCGAT CTGGTCTTCG TCTTCGCCAT CACTCAGCTG TCCCACCATC TGCTGCACGA CCTCTCGGTG ATCGGGCTGC TGCAGACGCT GGTCCTGTTC GTCGCCGTCT GGTGGGCGTG GATCGACACC GCCTGGGTCA CCAACTGGCT CGATCCGGAT CGCAAGCCGG TGCGGCTCAT GTTGCTGGCG CTGATGCTGG TGGGCCTCGT CTTGTCCGCG TCCCTGCCGA AGGCTTTCCA TGAGGGCGGC CTTGCCTTCG CCCTCGCTTA TGCGACGTTC CAGACGGGGC GCTCCGCCTT TACCATCTGG GCGGTGGCGC GCCACGATCG CGCCCAATCC CTGAACTTCA AGCGCATCCT GGCATGGCAG GCATTGGCGT CCGTGCTGTG GATCGTCGGC GCCTTCCTGC ACGGCGAGGC CCGGCTCGGC CTGTGGATGC TCGCCGTGGT GCTGGAGAGC CTCGCGCCCT CCACCGGCTT CTTCGTGCCG GGCCTCGGCG CCTCCAAGGC GGCGGACTGG AAGGTGGAGG GCCGGCACCT GTCCGAGCGC TGCGCCCTGT TCATCATCAT CGCACTGGGC GAATCCATCC TCGTCACCGG CGCCACCGCC TCCGACCTCG CGTGGACCGG CCTCAACCCA CATTTCCCAA GTAAGGCGCT GATTTCGCTG TCCTGA
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Protein sequence | MSGLGARQFL LRKAPEHGHH AVTFIELFFD LVFVFAITQL SHHLLHDLSV IGLLQTLVLF VAVWWAWIDT AWVTNWLDPD RKPVRLMLLA LMLVGLVLSA SLPKAFHEGG LAFALAYATF QTGRSAFTIW AVARHDRAQS LNFKRILAWQ ALASVLWIVG AFLHGEARLG LWMLAVVLES LAPSTGFFVP GLGASKAADW KVEGRHLSER CALFIIIALG ESILVTGATA SDLAWTGLNP HFPSKALISL S
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