| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1995 |
|---|
| Symbol | |
|---|
| ID | 5420702 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 2251328 |
|---|
| End bp | 2252305 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640881247 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_001416896 |
|---|
| Protein GI | 154245938 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATATTC TCGTCATCGG CGGCGCCGGC ATGGTCGGCC GCAAGCTCAT CGAACGCCTT
GCCCGCGAGG GGCGCCTGGG CGGCAAGCCC ATCACCCGCC TCACCGCCCA TGACGTGGTG
CCGCCCAAGC CGCCGCAGGC GCCCTTTCCC ATCGACACCC GGGTGTCGGA CCTCTCCGTG
CCCGGCGAGG CGGCGGCCGT GGTGGCGGAC AAGCCCGACG TGATCTTCCA CCTCGCGGCC
ATCGTCTCCG GCGAGGCGGA GGCGGACTTT GACAAGGGCT ACCGCATCAA CCTCGATGGC
ACGCGCCACC TGTTCGATGC GGTGCGGCTT ATGGAGGGCT ACACGCCGCG CCTGGTCTTC
ACCTCGTCCA TCGCGGTGTT CGGCGCGCCG TTCCCGGATG CCATCCCGGA CGAGTTCTTC
GCCACGCCCC TCACCTCCTA CGGCGCCCAG AAGGCCATCG GCGAGCTGCT GCTGGCGGAC
TATACCCGGC GGGGCTTCTT CGACGGCATC GGCATCCGCC TGCCCACCAT CTGCGTGCGC
CCCGGCCTGC CCAACAAGGC CGCCTCCGGC TTCTTCTCCG GCATCATCCG CGAGCCCCTT
GCCGGGCAGG ACGCCATCCT GCCCGTGTCG GAAGAGGTGA TGCACTGGCA TGCCTCGCCC
CGCTCGGCGG TGGGCTTCCT CATCCATGCC GCCACCCTCG ACGGCGAAAA GGTCGGCCCG
CGCCGCAACC TCACCATGCC GGGCCTCGCC GTGACCGTGG GCGAGCAGAT CGAGGCGCTG
CGCAAGGTGG CCGGCGACAA GGCGGTGGCC CGCATCAAGC GGGCGCCCGA TCCGGTGATC
GAGAAGATCG TCTCGGGCTG GCCGCGCAAG TTCGAGCCCC GCCGCGCCAC CGAGCTGGGC
TTCGTGGCGG AAAGCTCCTT CGAGGAGATC ATCCGCATCC ATATCGAGGA CGAGCTGGGC
GGCAAGATCG CGGACTGA
|
|---|
| Protein sequence | MHILVIGGAG MVGRKLIERL AREGRLGGKP ITRLTAHDVV PPKPPQAPFP IDTRVSDLSV
PGEAAAVVAD KPDVIFHLAA IVSGEAEADF DKGYRINLDG TRHLFDAVRL MEGYTPRLVF
TSSIAVFGAP FPDAIPDEFF ATPLTSYGAQ KAIGELLLAD YTRRGFFDGI GIRLPTICVR
PGLPNKAASG FFSGIIREPL AGQDAILPVS EEVMHWHASP RSAVGFLIHA ATLDGEKVGP
RRNLTMPGLA VTVGEQIEAL RKVAGDKAVA RIKRAPDPVI EKIVSGWPRK FEPRRATELG
FVAESSFEEI IRIHIEDELG GKIAD
|
|---|
| |