Gene Xaut_1988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_1988 
Symbol 
ID5423482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp2245056 
End bp2246177 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content67% 
IMG OID640881240 
Productpeptidase M50 
Protein accessionYP_001416889 
Protein GI154245931 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.319732 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTGGT CCCTCACCAT CGGCCGGCTC GGCGAGACCG CGATCCGCAT CCACGTCACC 
TTCCTGTTGT TCCTGGTGTG GATCTGGGCC GCCTATTATC GCTCCGGCGG GTCTTCGGCG
GCGTGGGAAG GCGTGCTGTT CGTGGCGCTG CTGTTCGCCT GCGTGCTGCT GCACGAGCTG
GGGCACGTTT TTGCTGCCCG CCGCTACGGG GTGAAGACCC CGGACATCAC CCTGTGGCCG
TTCGGCGGCA TCGCCAATCT GGAGCGGATC CCGGAGAAGC CGTCGCAGGA GCTGGTGGTG
GCCATCGCCG GGCCGCTGGT GAATGTGGTG ATCGCGCTGG TGCTGCTGGT GATCCTGAGC
GCCACCCTCG GCGGCACCGA CCTGACGGCG GACAACCTCG CCAAGATCGA GGATCCGCGC
ACCTCGATCC TGGTGAAGCT GGCCGGCGCC AACATCTTCC TGGTGGTGTT CAACCTCATC
CCGGCCTTTC CCATGGACGG GGGACGGGTG TTGCGGGCGC TGCTGGCCAT GAGGATGGGT
TATTCCAAGG CCACCGCCAC CGCCGCCTCC ATCGGCCAGG GCCTTGCCAT CGGCATGGGC
CTTCTGGGCA TCTTCACCAA TCCCATGCTG ATGATCATCG GTGTGTTCGT GTTCCTCGCC
GCATCGGGCG AGGCCGGTCA GGTGCAGCTG AAGGAAGCCT CGCGCGGCCT GTTGGTGGCG
GACGCCATGA TCACCCATTT CGAAACGCTG GGTCCACAAT CCACCGTGGA CGATGCCGCC
GACGCCCTCA TCCGCTCCAC CCAGAAGGAA TTCCCGGTGG TGGACGGCGC CGGCCACCTG
CGCGGCGTGC TCACCCGCGA CGCCATGATC CGCGCCATGA AGGACCAGGG GCCGCAGACC
GCCGTGATCG AGGTGATGCA GGCCGACATT CCGGTGGTGG AGGCCCGCTC GAAGCTCGAT
GCGGCGCTCA AGCTCATCAC CTCCGCCCAG GCCCCAGCCG TGGGCGTGGT GGACGGCTCC
GGAAAGCTGG TGGGCCTGCT GACACCGGAG AATGTGGGCG AGCTGATGAT GCTGCACGCC
GCCCGCCCCG AGCGCGGGGC GCATCCAACG CAGCGACCTT GA
 
Protein sequence
MPWSLTIGRL GETAIRIHVT FLLFLVWIWA AYYRSGGSSA AWEGVLFVAL LFACVLLHEL 
GHVFAARRYG VKTPDITLWP FGGIANLERI PEKPSQELVV AIAGPLVNVV IALVLLVILS
ATLGGTDLTA DNLAKIEDPR TSILVKLAGA NIFLVVFNLI PAFPMDGGRV LRALLAMRMG
YSKATATAAS IGQGLAIGMG LLGIFTNPML MIIGVFVFLA ASGEAGQVQL KEASRGLLVA
DAMITHFETL GPQSTVDDAA DALIRSTQKE FPVVDGAGHL RGVLTRDAMI RAMKDQGPQT
AVIEVMQADI PVVEARSKLD AALKLITSAQ APAVGVVDGS GKLVGLLTPE NVGELMMLHA
ARPERGAHPT QRP