| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1985 |
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| Symbol | |
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| ID | 5425421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 2242012 |
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| End bp | 2243145 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640881237 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_001416886 |
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| Protein GI | 154245928 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.122684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0341634 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCGA CCATGACCCA GGCCCAGGTG AACCAGGCCG AGATGAACCA GGCCGAAACC
GGCCTAGAGG ACCTGGACGA GGGCTTCACC CTCACGGTCC AGATCGCGGC GGAAGACGCC
GGCGAGCGGC TGGACCGTGT CCTGGCGCGC CGGTTGGCGC TTGAGGCGCC TGAACTCAGC
CGCACCCGCA TCCAGCGTCT CGTAACGGAA GGCCGGGTCT CCGTCAGCGG GCGTGTGGTA
GGGGACGCGG CGGGCCGGGT CAATGCCGCA GATGTCTATA CCCTGTTCCT GCCGCCCCCG
GAGGCAGCCG AGCCGGTGGC GGAGAACCTG CCGCTCACCA TCGTGTTCGA GGATGCCCAC
CTCGTGGTCA TCGACAAGCC GGCCGGGCTG GTGGTGCATC CGGCGCCGGG CCATGCCTCC
GGCACTCTGG TGAATGCACT CCTGTACCAT TGCGGCGACA GTCTCTCCGG TATCGGCGGG
GTGCGCCGGC CGGGCATCGT CCATCGCATA GACAAGGATA CCTCCGGCCT GCTGGTGGTT
GCGAAGTCCG ACCTGGCCCA CAAGGGCCTC GCCGCCCAGT TCGCCGACCA TGGCCGCACC
GGGCCGCTGG AGCGGGCCTA TCTCGCCTTC GTCTGGGGGG TGCCGGAGGC GCACGGCAGC
GTGGACGCGC CCATCGACCG GCATCCCAGC CATCGCCAGA AGATGGCGGT GCGCCTCTCC
GGACGGAACG CCATCACCCA TTGGGAGGTG CAGGAGGCCT TTGTCGGCCA CGGCCGCACC
CATCTGCGCA ACAAGGGGCA GGTGAAGGGC GAGGTGAAGA TGGAGGAGGG GGTGGCCAGC
CTCATCGAAT GCCGGCTGGA GACCGGCCGC ACCCACCAGA TCCGCGTCCA CATGGCCCAT
GTGGGCCATC CGCTGCTGGG GGACGAGGTC TATGGCCAGG GCTTCCGCAC CAAGGAGACG
CTGCTGCCCG AGGACGCCCG CGAACACCTC GCGCGTCTCG GCCGGCAGGC GCTGCATGCG
GCCCGGCTCG GCTTCGCCCA TCCGGTGACG GGGGAGACGT TGTCCTTCGA AAGCCAGCTG
CCGGAAGACC TTGCCGCCCT CGCCGAGGTG CTGGGCGGGT GTGCATCCGC GTAA
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| Protein sequence | MDATMTQAQV NQAEMNQAET GLEDLDEGFT LTVQIAAEDA GERLDRVLAR RLALEAPELS
RTRIQRLVTE GRVSVSGRVV GDAAGRVNAA DVYTLFLPPP EAAEPVAENL PLTIVFEDAH
LVVIDKPAGL VVHPAPGHAS GTLVNALLYH CGDSLSGIGG VRRPGIVHRI DKDTSGLLVV
AKSDLAHKGL AAQFADHGRT GPLERAYLAF VWGVPEAHGS VDAPIDRHPS HRQKMAVRLS
GRNAITHWEV QEAFVGHGRT HLRNKGQVKG EVKMEEGVAS LIECRLETGR THQIRVHMAH
VGHPLLGDEV YGQGFRTKET LLPEDAREHL ARLGRQALHA ARLGFAHPVT GETLSFESQL
PEDLAALAEV LGGCASA
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