Gene Xaut_1969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_1969 
Symbol 
ID5424445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp2225931 
End bp2227022 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content71% 
IMG OID640881221 
ProductPoly(3-hydroxybutyrate) depolymerase-like protein 
Protein accessionYP_001416870 
Protein GI154245912 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3509] Poly(3-hydroxybutyrate) depolymerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0935555 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCCTGC GTCAGTCGCA ACCAGGCCGG GTGCGGCACG CGATCTTCGT GGTCACGGGT 
GTTCTCGTCC TGTTCGGTGC GATGTTCACG ATTCTCCCCG CGCGGGCGGA CGCCGTGCGT
GACCTGCGGC TTTCGGTGAA CGGCGAGGAC CGGCGCTTCG TGGTGGTCAC GCCCGAGGGG
GTAAGCGGGC CAGCACCGGT CGTGATCGCG CTCCACGGCG CGGCGCAAAC CCCAGAAAGC
TTCCGCGCCT ATTTCGGGCT CGATGCGGCG GCGGCGGCCC ACGGCTTCGT GGCGGTCTAT
CCGGAAGGGG AGGGCCGGGT GTGGAACGAC GGGCGGCCCG CCGCCATGCG CCTCAAGATG
ATGCTGCGGC CCGGCGACGA CGTGGCGTTC CTGGTGGCGC TGGTCCAGCG GCTGGCGCAG
GACGGCATCG CCGATCCGGC GCGCATCTAT CTCACCGGCA TTTCCAACGG CGGCTTCATG
GTGCAGCGCA TGGCCTGCGA GCATGCGGAC CTGTTCGCCG CCTATTCGTC CATCATGGCC
ACGGCGCCGG CCAATTATCG CGAGGAATGC AAGCCCGACC GGCCGGTCCC CATCCAGTTC
ATCCATGGTA CGGCGGATTC CGTCATCGCC TATTCGGGCT TCTGGACGCC AGTGGGGGCG
ACCCTGTCGG CACCCGAGAG CGCGCGCCTG TTCGCCCGCA TCAACGGGTG CGGCGCCTCG
AACCAGCGCG AGCTGCCCGA TCTCGACCAG ACCGACGGCA CCACGGCGGT GCTGCGGCGC
TGGGACGGCT GCCGGGATGG CTCGGCGGTG GAGCTCATCA GCATCGAGCG CGGCGGCCAC
CAGTCGCCGG CGCGGGTGGA CACGAAGCCC GACCTCGCCA CCCCTTTCCT CGGTCTGCGC
AGCCGCGACA TCGATTCCGG CGAGGAGGTC TGGCGCTTCA TGTCCGCCTT CGGCGGCGGG
GTCACCTCCG GGTCGCGCCT TGGTGCGGGC GCGGTGCCCT TGCCACCGCC GTCCCCGTTG
CGGGGCAACC GCACGGGCGC CGTGGTGCGC CCGGCGGCGG CCGCCGATCA GCGCGGGATC
AGCGCCCAGT AG
 
Protein sequence
MALRQSQPGR VRHAIFVVTG VLVLFGAMFT ILPARADAVR DLRLSVNGED RRFVVVTPEG 
VSGPAPVVIA LHGAAQTPES FRAYFGLDAA AAAHGFVAVY PEGEGRVWND GRPAAMRLKM
MLRPGDDVAF LVALVQRLAQ DGIADPARIY LTGISNGGFM VQRMACEHAD LFAAYSSIMA
TAPANYREEC KPDRPVPIQF IHGTADSVIA YSGFWTPVGA TLSAPESARL FARINGCGAS
NQRELPDLDQ TDGTTAVLRR WDGCRDGSAV ELISIERGGH QSPARVDTKP DLATPFLGLR
SRDIDSGEEV WRFMSAFGGG VTSGSRLGAG AVPLPPPSPL RGNRTGAVVR PAAAADQRGI
SAQ