| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1951 |
|---|
| Symbol | |
|---|
| ID | 5425000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 2206667 |
|---|
| End bp | 2208085 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640881203 |
|---|
| Product | sugar transferase |
|---|
| Protein accession | YP_001416852 |
|---|
| Protein GI | 154245894 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
|---|
| TIGRFAM ID | [TIGR03023] Undecaprenyl-phosphate glucose phosphotransferase
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.770051 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0120821 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACGTT GGACCCACGG GCTCGTCAAC CGCCTCGTCC TGTTGTGTGA CGTCGCCATG
GCGGCGCTGG CCGCCATCAT TGCCCACGGA CGCTGGGATT TCCTGTCCTG GAGCCAGATG
GCCATCCTCT GGGCCATCGG CGTCTTCGCC TTCGTCCAGA TCCTGCAGAC CGGCCGCGCC
TATCGGGTCG AGCATTACAC GCGCCCGCTG CGCCAGCTCG GTCACCTCGC GGTGGCCGGC
GTGCCGGCCG GCGCGCTTCT GGCGATCTGC TACTACGCCA TCATCCCCAT CGGCTCGACC
AACCTCGTTG CGCTGCTCGG CTGGGGCATC CTGACCGCGC TGACGCTGAT CTTCGGCCGC
TTCGTGCTGG TGCGGACCGG CGTGGCGCTG GTGAAGACCC GCGGAGTCCT GCGACGCAAT
GCGGTGATCA TCGGGGATCC GGCCCGGGCC CGCGACCTCG TGCGCCGCTA CCGCGAGGAG
GAGGGCGCGA ACGGCCTCAT CACCTTCGTC GGCATGTTCG ACGAGGGACA CATGCCGGGC
GAGATGACCC CGCCACCCCC CGCGCCCGAC GGCGTTCCCG CGATGGGCGG ACTCGCCGAC
CTGCTGGAAT ATGTGAAGCA CAATCCGGTG GACATCGTGG TCGTCGCCAA GAGCTGGGAC
GATCCCGCAG CCATCAGCAC CATCGCCAAC CAGATGTACC AGATCGCCGC CGACGTCATC
GTCGAGCTGG ATCCCGAGCG CTTCATGCTC AACGACGCCC GGATCACGCG CATCGCCGGC
GAGCCCGCGC TCCAGGTGCA GCAGCAGCCA CTCAAGGGCT CGCTGGGGCT GCTGAAGGGG
GTGGAGGACT ATGTGGTGGC CACCATCGGC CTCATCCTCA CCGCCCCCAT CCTGCTGGTC
GCCGCCGCCG CCATCAAGCT GGATTCCCCC GGGCCCATCC TGTTCCGCCA GCCGCGCGTG
GGCCTCAACA ACCGCGTCTT CTCCTGCTTC AAGCTGCGGA CCATGCGGGT CGATCTCTCG
GACGACGGCT CCCGCGGCAC CACCAAGGAC GATCCGCGCA TCACCCGCAT CGGCGCCTTC
CTGCGCTCCA CCTCCATCGA CGAACTGCCC CAGCTCATCA ATGTGCTGCG GGGCGAGATG
TCGGTGGTCG GGCCGCGTCC CCATGTGCCC AACATGCAGG TCGCCACCAA CGTGCGCTAC
GAGGCGATCC GGCAATATGT GGCGCGCTAC CGGATGAAGC CCGGCATCAC CGGCTGGGCC
CAGATCAACG GCATGCGCGG CGGCATCAAC ACCCTCGAAA AGGCGGAGCG GGGCGTGGAG
CTCGACCTTT TCTACATCGA GCACTGGTCC ATATGGTTCG ACATCAGAAT CATGCTGCTC
ACCATCACCA AGGGCATGGC CGGGCCGGCG GTCTTCTGA
|
|---|
| Protein sequence | MTRWTHGLVN RLVLLCDVAM AALAAIIAHG RWDFLSWSQM AILWAIGVFA FVQILQTGRA
YRVEHYTRPL RQLGHLAVAG VPAGALLAIC YYAIIPIGST NLVALLGWGI LTALTLIFGR
FVLVRTGVAL VKTRGVLRRN AVIIGDPARA RDLVRRYREE EGANGLITFV GMFDEGHMPG
EMTPPPPAPD GVPAMGGLAD LLEYVKHNPV DIVVVAKSWD DPAAISTIAN QMYQIAADVI
VELDPERFML NDARITRIAG EPALQVQQQP LKGSLGLLKG VEDYVVATIG LILTAPILLV
AAAAIKLDSP GPILFRQPRV GLNNRVFSCF KLRTMRVDLS DDGSRGTTKD DPRITRIGAF
LRSTSIDELP QLINVLRGEM SVVGPRPHVP NMQVATNVRY EAIRQYVARY RMKPGITGWA
QINGMRGGIN TLEKAERGVE LDLFYIEHWS IWFDIRIMLL TITKGMAGPA VF
|
|---|
| |