Gene Xaut_1920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_1920 
Symbol 
ID5425457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp2171724 
End bp2172506 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content65% 
IMG OID640881173 
Productactivator of Hsp90 ATPase 1 family protein 
Protein accessionYP_001416822 
Protein GI154245864 
COG category[K] Transcription
[S] Function unknown 
COG ID[COG0640] Predicted transcriptional regulators
[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0328503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.836165 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGACG TCTTCGCCGC CTTGTCCCAT CCCGTCCGGC GAACGGTGCT TGATCTGCTG 
CGGGAGCGAG ATGGCCGGAC GCTGGGCGAG CTGGAGCAGG CGCTGAAGCC GCACACCACC
CTCACCCGCT TCGGCGTGAT GAAACACCTC AAGGTGCTGG AGGAAGCCCA TCTCCTCCTG
ACCCGGAAAG TGGGCCGCGA GAAGCACCAC TACCTCAACC CGGTTCCCAT CCGGCTGGTC
GCCGACCGCT GGATTTCCCG TTATGCCGAG CCGCACGTGG CGGCGATGAC TGGCCTGAAG
CTTCTTTTGG AGACCAATCC AATGCGTTCC ACCGCGCCGA AGCACGTCTA CGAGCTTTTC
ATCAAGGCGA CGCCTCAAGC CCTGTGGGAC GTCCTTACCG ACGACACCAA GACGCCGCTC
TACGAGCATT TCAACATGAC CAGCCGCACC GAATGGCGGC CCGGCGGCGC GCGGACCTAT
TACATGGGCG ACCGGCAGGT CATCGCCTGC ACCATCCTGG ACATGGACCC ACCCCATCGC
CTTGTCCTGT CCTTCCACGC CCAGTGGGCA CCGGACGTGG CGGCGGATCA GCCTTCGCGG
GTGACGTGGG AGATCGCGCC GATCGGCACT GATGCCTGCA AGCTGACGCT CACCCACAAT
GACTTCGACG GAGAGACGGC AACCTCCAAG GCCGTGGTGC ATGGCTGGCC GGAAGGATTG
TCGCGGCTCA AGACCCTGGT CGAGACGGGC GAGCCCTTCC AGCTGGCCGC GCCGGCCGCC
TGA
 
Protein sequence
MDDVFAALSH PVRRTVLDLL RERDGRTLGE LEQALKPHTT LTRFGVMKHL KVLEEAHLLL 
TRKVGREKHH YLNPVPIRLV ADRWISRYAE PHVAAMTGLK LLLETNPMRS TAPKHVYELF
IKATPQALWD VLTDDTKTPL YEHFNMTSRT EWRPGGARTY YMGDRQVIAC TILDMDPPHR
LVLSFHAQWA PDVAADQPSR VTWEIAPIGT DACKLTLTHN DFDGETATSK AVVHGWPEGL
SRLKTLVETG EPFQLAAPAA