| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1919 |
|---|
| Symbol | |
|---|
| ID | 5425456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 2170655 |
|---|
| End bp | 2171611 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640881172 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001416821 |
|---|
| Protein GI | 154245863 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.301552 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.616957 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTCCC ACTGGACCCT GAAGCAGCTG CGGCTGGTGG CCCTCGCCGC CGCCTCCGGC
TCCTACGCCA AGGCCGCTCA GGACATGGGT TTAAGCCCGC CAGCGGTGAC CGCGCAGATG
AAGGCGCTGG AGGAGGACCT CGGGGTGCCG GTGTTCGAGC GGGTGGACGG CCGGCTGCGA
CCGACCGCCG CTGGCGCGGA GCTTCTGGCC GCCCAGCACC GAATCGCCCA CGCCCTCCAG
GAGGCGGAGC GGGCAATCGC GGCCCTGAAA AGCCCCGATC GCGGATCGGT GGTGGTGGGG
GTGGTCTCCA CCGCGAAGTA TTTCGCGCCC ATGGCGCTGG CGGCATTCCG CAAGCGCCGC
CCCGAGATCG AGTTGAAGCT CATGATCGGC AACCGGGAAG AGATCATCGC CGGGCTGGTG
AGCCTCGATT TCGACGTGGC CATCATGGGC CGTCCCCCGG CGGCGCTGGA GGCGAAGACC
GAGATTCTTG GGGATCACCC CCATGTGGTC ATCGCCCCGC CCGAGCACCG TCTCATCGGC
CAGCGCATCT CCCCCATGGA CCTGGCGAAG GAGCCCCTGC TGGTGCGCGA GCCGGGATCG
GGCACCCGCA TCCTCATGGA GCGGGTGTTC GAGGAGGCGG GCGTGGCCCA GCCTGCCATC
GCCATGGAGA TCGGCTCCAA CGAGACCATC AAGCAGGCGG TGATGGCGGG GCTGGGCCTG
TCCTTCATCT CCGCCCACAC GGTGGCGGCC GAGGTGGCGG ACGGGCGCCT GAAGGTGCTG
GAGGTGCAGG GCCTGCCGGT GGTGCGCCAG TGGCTGGTGG TGCGGGCCAA GGAGAAGCGC
CTGCTGCCGG CGGGGCGGGC GCTGCTGGAT TTCCTCGCCC GGGAGGGCGG CAGCTTCCTG
CCGCAGATGC CGGAAGGCGA GGGTGGCCGC TGCTTCCTGC CGGAGGCGCG CGCCTAG
|
|---|
| Protein sequence | MASHWTLKQL RLVALAAASG SYAKAAQDMG LSPPAVTAQM KALEEDLGVP VFERVDGRLR
PTAAGAELLA AQHRIAHALQ EAERAIAALK SPDRGSVVVG VVSTAKYFAP MALAAFRKRR
PEIELKLMIG NREEIIAGLV SLDFDVAIMG RPPAALEAKT EILGDHPHVV IAPPEHRLIG
QRISPMDLAK EPLLVREPGS GTRILMERVF EEAGVAQPAI AMEIGSNETI KQAVMAGLGL
SFISAHTVAA EVADGRLKVL EVQGLPVVRQ WLVVRAKEKR LLPAGRALLD FLAREGGSFL
PQMPEGEGGR CFLPEARA
|
|---|
| |