Gene Xaut_1894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_1894 
Symbol 
ID5423663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp2134366 
End bp2136555 
Gene Length2190 bp 
Protein Length729 aa 
Translation table11 
GC content72% 
IMG OID640881142 
Productputative Chase2 sensor protein 
Protein accessionYP_001416796 
Protein GI154245838 
COG category[T] Signal transduction mechanisms 
COG ID[COG4252] Predicted transmembrane sensor domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0276882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGTCCC GCCTCTATTG GCTCGCCGTG GGCGGCCCCC TCGCCGCCGG CCTCCTGGTC 
ATGGGCGCCG ATCCCGGCCC GCTGGCGGAC GCGCGCAACG GCCTGTTCGA CCTCTACCAG
CGCGCCGCTC CCCGTGCCTA CGACCCGGAC CTGCCGGTGC GCGTGGTGGA TGTGGACGAG
GCCTCGCTTG CCCGCATCGG CCAATGGCCC TGGCCCCGCG CCACAGTTGC CCGGCTGGTG
GACAAGCTTG CCGCATCGGG CGCCGGCGCC ATCGCCTTCG ACATGGTGTT CTCCGAACCG
GACCGGCTCG ACCCCGCCGC CGTGGTGGGC CTGCTGCCCG AGGATGTGCG CGCACCGGTC
CAGACCGCTT TGGCCGGCCG CGAGAGCAAC GATGAGATCC TCGCCCGCGC GCTTGCGGAA
AGCCCGTCCG TGCTGGGCGC GGTGCTCACG GGAACGCGTA CCGGCACCAC CTATCCGGCG
AAATGGGGCA TCGCCGCCGC CGGCGACGAT CCGCTCGCTT TCGCGCCGCG CTTCGCCGGC
GCGGTGGCGC CCCTGCCCGG CCTTGCGGCG GCGGCAAAAG GCATCGGGGC GCTGAACTGG
CTGCCCGACC GCGACCAGGT GGTGCGCCGC GTGCCCCTGC TGCTCGCGTT CGACGGCAAG
CTGGTGCCCG GCCTCGGCGC CGAGGCGCTC AGGGTGGCGC AGGGGGCGAC CACCTATGTG
GTGCGCGCCT CCAACGCCAG CGGCGACGAG GGCTTCGGCA CCAAGTCCGG CATCACCGCG
GTGAAGATCG GTGCCCTCGA CGTGCCCACC GACGCCCAGG GGGAAGTGCG GGTGCGCTTT
ACCCCCACCG ACCCGCGCCG CTTCCTCTCC GCCGCCGCCG TGCTGGATGG CACCGTGCCG
CGGGAGGAGC TGGAGGGGCG GATCGTGCTG GTGGGTACCA GCGCCGCCGG CCTCATGGAC
ACGCGCGCCA CCCCCATCGA CGCGGCGGTG GCGGGGGTGG AAATCCAGGC CCAGCTCATC
GAGCACATGG TGACCGGGGC CAACCTGGTG CGGCCGGACT GGGCGCGCGG GGCGGAAATG
GTGCTCACGG CGGTGCTGGG CCTGCTGCTG GCCCTGATCC TGCCCCGCGT CCCGGCGCTG
GCGGCGGGGG TGGCCGGGCT GGGGGTGCTG GCGGCGCTGG CGGCGGGGGC ATGGTTCGCC
TTCACCCGTC TCGACCTGCT GCTCGATCCC ATGGGGCCGG GGTGGGCGGT GCTCGGCGTC
TATCTCATGG GAGTGCTGGC GCTCTATCGC GACGAGCAGC AGCAGAAGAA ATGGGTGCGC
TCGGTGTTCG GCCGCTTCGT CTCGCCCCAG GTGGTGGAGA AGCTGGCGGA AAATCCCGAG
CGCCTGGTGC TCGGCGGCGA GACGCGGGAG ATCACCATCC TGTTCTGCGA CCTGCGCGAT
TTCACCTCGC TGTCGGAGAC CATGGACGCG CAGGCGCTCA CCCGCTTCAT GAATGCCTAT
CTCACCCCCA TGACGCAGGT GGTGCTGGCC CATGGCGGCA CCATCGACAA ATATATCGGC
GACGCCATCA TGGCGTTCTG GAACGCGCCC GTGGACGATC CGGCCCACGC CCGCAACGCG
GCCCTGTGCG CGCTGGCCAT GTCGGCCCGG CTCGATGCCC TGAACGTGGA ATGGAGCCGG
CAGGCGGAGG CGGCGGGCCG GCCGTTCTCG CCGGTGCGCT GCGGCATCGG GCTCGCCACC
GGGCCGTGCT GCGTGGGCAA CCTCGGCTCC GACCAGCGGC TGGAATATTC CTGCCTGGGC
GATGACGTGA ACCTCGCCTC GCGCATCGAG GGGGCGACCA AGTCCATGCG CGTGGACATC
CTGGTCTCCG AGGCGACGCG CGCCGCCGTG GCCGACCTGC CGTTCCTGGA AGCCGACCTC
CTGATGCTGA AGGGCAAGTC GCGGGCAAGC CAGCTCTATC TGCTGGCGGG AGACGCCGCC
TTCGCCGGCT CCGGCGCGTT CGACGCGCTG GCCCGGCGCC ACGCCGCGCT CATGTCGGCC
TATGGCGCCG GGCATTTTGC GCTGGCCCTC GCCGCCGCCG AGGCGCTGGC GAGCGAAGGT
CCGGACCGCC TCTCGCGCTT CTACACGCTC TATGCCGAGA GGTGCGCGAA TGCCTCCACC
ACCCCGACGC CTGCCGGAAG CATCAACTAG
 
Protein sequence
MWSRLYWLAV GGPLAAGLLV MGADPGPLAD ARNGLFDLYQ RAAPRAYDPD LPVRVVDVDE 
ASLARIGQWP WPRATVARLV DKLAASGAGA IAFDMVFSEP DRLDPAAVVG LLPEDVRAPV
QTALAGRESN DEILARALAE SPSVLGAVLT GTRTGTTYPA KWGIAAAGDD PLAFAPRFAG
AVAPLPGLAA AAKGIGALNW LPDRDQVVRR VPLLLAFDGK LVPGLGAEAL RVAQGATTYV
VRASNASGDE GFGTKSGITA VKIGALDVPT DAQGEVRVRF TPTDPRRFLS AAAVLDGTVP
REELEGRIVL VGTSAAGLMD TRATPIDAAV AGVEIQAQLI EHMVTGANLV RPDWARGAEM
VLTAVLGLLL ALILPRVPAL AAGVAGLGVL AALAAGAWFA FTRLDLLLDP MGPGWAVLGV
YLMGVLALYR DEQQQKKWVR SVFGRFVSPQ VVEKLAENPE RLVLGGETRE ITILFCDLRD
FTSLSETMDA QALTRFMNAY LTPMTQVVLA HGGTIDKYIG DAIMAFWNAP VDDPAHARNA
ALCALAMSAR LDALNVEWSR QAEAAGRPFS PVRCGIGLAT GPCCVGNLGS DQRLEYSCLG
DDVNLASRIE GATKSMRVDI LVSEATRAAV ADLPFLEADL LMLKGKSRAS QLYLLAGDAA
FAGSGAFDAL ARRHAALMSA YGAGHFALAL AAAEALASEG PDRLSRFYTL YAERCANAST
TPTPAGSIN