| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1889 |
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| Symbol | ispG |
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| ID | 5424024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 2128068 |
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| End bp | 2129414 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640881137 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_001416791 |
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| Protein GI | 154245833 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0222633 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCATGA CCACCCTTCA GTCCACGCCT GCGACCCAGG TTCCCCCGGC CACCACTGCC
GTGGTCCCCG CCGAGCTGCT TGAGGCGGGT CCCGCCGCGC GGCGTCCGAC GGTGGGCGTT
CCGGTGGGCC GGGTGATGGT GGGCGGCGGC GCGCCGGTGG TGGTGCAGTC CATGACCAAC
ACCGACACCG CCGACATCGA GGGCACCGTG CGCCAGGTGG CCGCGCTGGC CCGCGCCGGC
TCGGAAATCG TGCGCATCAC GGTGGACCGC AACGAGGCCG CCGCCGCCGT GCCGCACATC
AAGGAAAAGC TGCTGGCGCA GGGCATCGAC GTGCCGCTGG TGGGCGATTT CCATTACATC
GGCCACAAGC TGCTGGCCGA TTATCCGGCC TGCGCCGAGG CGCTCGACAA ATACCGCATC
AATCCGGGCA ACGTGGGCTT CGGCGACAAG AAGGACCGGC AGTTCGCCGC CATCGTCGAG
ACCGCCATCC GCCACGACAA GCCGGTGCGC ATCGGCGCCA ACTGGGGCTC CCTCGATGGT
GAGCTGCTGA CCCGCCTGAT GGACGAGAAC GCCTTGCTGC CACAGCCGGC GGAAGCCCGC
GCCGTGACCC GCGAGGCGCT GGTGCGCTCG GCCCTGCTCT CGGCGGGGCT GGCGGAGGAG
ATCGGCCTTC CCCGCAACCG CATCATCCTC TCGGCCAAGG TCTCGGCGGT GCAGGACCTC
ATCGCCGTCT ATGGCGAGCT GTCCCGCCGC GCCGACTATG CGCTGCATCT CGGCCTGACC
GAGGCGGGCA TGGGCTCGAA GGGCATCGTT GCTTCCACGG CGGCCATGGG GGTGGTGTTG
CAGGCCGGCA TCGGCGACAC CATCCGCGTC TCCCTGACCC CGGAGCCCAA CGGCGATCGC
ACCCGCGAGG TGCAGGTGGC GCAGGAAATA CTGCAGACCA TGGGCCTGCG CACCTTCGTG
CCGCTGGTGG CCGCCTGCCC CGGCTGCGGG CGCACCACCT CCACCGTGTT CCAGGAGCTG
GCGCAGAGCG TGCAGGAGAT GATCCGCACC CGCATGCCGG TCTGGAAGGC GAAATTTCCC
GGCGTCGAGA CCCTGAACGT GGCGGTGATG GGCTGCATCG TGAACGGCCC GGGAGAGAGC
AAGCATGCCG ACATCGGCAT CTCCCTGCCC GGCACCGGGG AGACCCCGTC CGCCCCGGTC
TTCATCGACG GCAAGAAGGT GGCGACCCTG CGCGGCGCCA ACATCCAGGA CGAGTTCCGC
CGGATGGTGG AGGCCTATGT GGAGCAGCGC TTCGGCGTCG GCGGCACGGC GGCGGCAGGG
GCATCCCCGG CGGACGCGGC GGAGTAG
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| Protein sequence | MPMTTLQSTP ATQVPPATTA VVPAELLEAG PAARRPTVGV PVGRVMVGGG APVVVQSMTN
TDTADIEGTV RQVAALARAG SEIVRITVDR NEAAAAVPHI KEKLLAQGID VPLVGDFHYI
GHKLLADYPA CAEALDKYRI NPGNVGFGDK KDRQFAAIVE TAIRHDKPVR IGANWGSLDG
ELLTRLMDEN ALLPQPAEAR AVTREALVRS ALLSAGLAEE IGLPRNRIIL SAKVSAVQDL
IAVYGELSRR ADYALHLGLT EAGMGSKGIV ASTAAMGVVL QAGIGDTIRV SLTPEPNGDR
TREVQVAQEI LQTMGLRTFV PLVAACPGCG RTTSTVFQEL AQSVQEMIRT RMPVWKAKFP
GVETLNVAVM GCIVNGPGES KHADIGISLP GTGETPSAPV FIDGKKVATL RGANIQDEFR
RMVEAYVEQR FGVGGTAAAG ASPADAAE
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