Gene Xaut_1888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_1888 
Symbol 
ID5424023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp2127425 
End bp2127952 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content72% 
IMG OID640881136 
Productferric uptake regulator family protein 
Protein accessionYP_001416790 
Protein GI154245832 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0469325 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCATT CTGGCGACCA TCCTAGTGAT CATGATCACG GCCAATGCGT GGCCGGCGCC 
CTGGCGCGCA TGGAGAAGTG CTGCGCGGAG AAAGGCCTGC GCCTGACGCC GCTGCGCCGT
AGCGTCATGA AGGCGCTGGC CGAGACCCAC GTGCCGCTCG GCGCCTACGA GATCGTGGAG
CGCCTGGCCG CCGGCGGCGA GCCGACGCCG CCCATGTCGG TCTACCGGGT GCTGGATTTC
CTGGTGGCCG AGGGGCTCGC CCACCGCATC GAGAGCCGCA ACGCGTTCCT GGCCTGCGGC
CATCCCCATG ATGCCGAAGA GGTGGTGGTG TTCCTCATCT GCGAACGCTG CGGCCTGACC
AAGGAAGTGG CCTCCCACGC GGTCGGGCGC GACCTTGCCT GGGCGGCGCG GGCCGCCGGC
TTCGAGCCGC GCCAGCGGGT GCTGGAGGTG GCTGGCACCT GCGCCAGCTG CCGGGAAGCG
GCGTCCGCAG CCGCGCCGGG AGCGGCCGAG ACGGCCGGCG CCGGTTGA
 
Protein sequence
MTHSGDHPSD HDHGQCVAGA LARMEKCCAE KGLRLTPLRR SVMKALAETH VPLGAYEIVE 
RLAAGGEPTP PMSVYRVLDF LVAEGLAHRI ESRNAFLACG HPHDAEEVVV FLICERCGLT
KEVASHAVGR DLAWAARAAG FEPRQRVLEV AGTCASCREA ASAAAPGAAE TAGAG