Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_1887 |
Symbol | |
ID | 5423937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | - |
Start bp | 2126436 |
End bp | 2127218 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640881135 |
Product | 3-hydroxybutyrate dehydrogenase |
Protein accession | YP_001416789 |
Protein GI | 154245831 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0166984 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAAGG GTAAAGTCGC CGTCGTCACC GGATCCACCA GCGGAATCGG GCTCGCCTAT GCCCGGGCCT TCGCCAAGGA AGGCGCGAAC ATCGTGATCA ACGGTCTCGG TGACGCCGCC GCCATCGAGA AGGAGCGTGC CGCGATCGAG AGCGAATTCG GCGTGAAGTG CCTCTATTCG CCCGCCAACA TGCTGAAGCC CGATGAAATC GCCGGCATGG TGCAGCTGGC CGAGACCGAG CTGGGCGCCT GCGATATCCT CGTGAACAAT GCGGGCATCC AGCATGTGGC GCCCATCGAG GAGTTCCCGA TCGACACCTG GAACACCATC ATCGCCATCA ACCTGTCGGC GGCCTTCTTC GCCATGCGCG CGGCCATTCC CGGCATGAAG GCGCGCAAGT GGGGCCGCAT CATCAACACT GCCTCCGCCC ATGCGCTGGT GGCCTCGCCC TTCAAGTCGG CCTACGTCTC GGCCAAGCAC GGCATCGCCG GCCTGACCAA GACCGCGGCG CTGGAGACGG CGGAATTCGG CATCACCGTC AACGCCATCT GCCCCGGCTA CGTGTGGACG CCCCTCGTCG AGAAGCAGAT CCCCGACACC GCCAAGGCCC GCGGCATGAC CGAGGAGCAG GTGAAGAAGG AGGTGATTCT CGCCGCCCAG CCCACGAAGG AATTCGTGAC GGTGGAAGAG GTCGCGGCCT ACGCGGTGTT CCTTGCCTCC GACAACGCCC GCTCCATCAC CGGCGCCATG CAGGTGATCG ACGGCGGCTG GACCGCTGCG TGA
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Protein sequence | MLKGKVAVVT GSTSGIGLAY ARAFAKEGAN IVINGLGDAA AIEKERAAIE SEFGVKCLYS PANMLKPDEI AGMVQLAETE LGACDILVNN AGIQHVAPIE EFPIDTWNTI IAINLSAAFF AMRAAIPGMK ARKWGRIINT ASAHALVASP FKSAYVSAKH GIAGLTKTAA LETAEFGITV NAICPGYVWT PLVEKQIPDT AKARGMTEEQ VKKEVILAAQ PTKEFVTVEE VAAYAVFLAS DNARSITGAM QVIDGGWTAA
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