Gene Xaut_1887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_1887 
Symbol 
ID5423937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp2126436 
End bp2127218 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content65% 
IMG OID640881135 
Product3-hydroxybutyrate dehydrogenase 
Protein accessionYP_001416789 
Protein GI154245831 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01963] 3-hydroxybutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0166984 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAGG GTAAAGTCGC CGTCGTCACC GGATCCACCA GCGGAATCGG GCTCGCCTAT 
GCCCGGGCCT TCGCCAAGGA AGGCGCGAAC ATCGTGATCA ACGGTCTCGG TGACGCCGCC
GCCATCGAGA AGGAGCGTGC CGCGATCGAG AGCGAATTCG GCGTGAAGTG CCTCTATTCG
CCCGCCAACA TGCTGAAGCC CGATGAAATC GCCGGCATGG TGCAGCTGGC CGAGACCGAG
CTGGGCGCCT GCGATATCCT CGTGAACAAT GCGGGCATCC AGCATGTGGC GCCCATCGAG
GAGTTCCCGA TCGACACCTG GAACACCATC ATCGCCATCA ACCTGTCGGC GGCCTTCTTC
GCCATGCGCG CGGCCATTCC CGGCATGAAG GCGCGCAAGT GGGGCCGCAT CATCAACACT
GCCTCCGCCC ATGCGCTGGT GGCCTCGCCC TTCAAGTCGG CCTACGTCTC GGCCAAGCAC
GGCATCGCCG GCCTGACCAA GACCGCGGCG CTGGAGACGG CGGAATTCGG CATCACCGTC
AACGCCATCT GCCCCGGCTA CGTGTGGACG CCCCTCGTCG AGAAGCAGAT CCCCGACACC
GCCAAGGCCC GCGGCATGAC CGAGGAGCAG GTGAAGAAGG AGGTGATTCT CGCCGCCCAG
CCCACGAAGG AATTCGTGAC GGTGGAAGAG GTCGCGGCCT ACGCGGTGTT CCTTGCCTCC
GACAACGCCC GCTCCATCAC CGGCGCCATG CAGGTGATCG ACGGCGGCTG GACCGCTGCG
TGA
 
Protein sequence
MLKGKVAVVT GSTSGIGLAY ARAFAKEGAN IVINGLGDAA AIEKERAAIE SEFGVKCLYS 
PANMLKPDEI AGMVQLAETE LGACDILVNN AGIQHVAPIE EFPIDTWNTI IAINLSAAFF
AMRAAIPGMK ARKWGRIINT ASAHALVASP FKSAYVSAKH GIAGLTKTAA LETAEFGITV
NAICPGYVWT PLVEKQIPDT AKARGMTEEQ VKKEVILAAQ PTKEFVTVEE VAAYAVFLAS
DNARSITGAM QVIDGGWTAA