| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1848 |
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| Symbol | |
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| ID | 5423629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 2078843 |
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| End bp | 2080324 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640881096 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase |
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| Protein accession | YP_001416750 |
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| Protein GI | 154245792 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.392693 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGCGG GCTTCGCAGG AGGTAGCGGC ATGAACATGA GCGCTGGCAT GAGCGGTCGG
GTCCTGCACA CAGTTGGCGA AATGGTGGAG GCCACGGGCG CCGCCGTGCG CGGGGCGCCC
CACGACGTCA CCGGCATCTC CATCGACAGC CGCACGCTCG TCCCCGGCGA CGCCTTCTTC
GCCATCACCG GCGAGAACAG CGACGGCCAC GCCTATGTGG AGAAGGCGCT CGGTGCCGGC
GCGGCCCTCT GCGTCGTCGC CCGTGATCGG GCCGATGGCT TCCCCGCCGA CGCGCCGCTG
CTGGTGGTGG ACGACGTGCT CGCCGCCCTC ACCGACGTGG CCCGCGCCGC CCGCGCGCGC
TCAAAGGCGC AGATCGTGGC GGTAACCGGA TCGGTGGGCA AGACCACCAC CAAGGAGGCC
CTGCGCATCG CGCTGGGCGC CGATGGGGAG ACCCACGCCT CCGCCGCCTC CTACAACAAT
CACTGGGGCG TGCCCCTGTC GCTGGCCCGC TTCCCGCGGG AGGCGCGCTA CGGCGTGTTC
GAGATCGGCA TGAATCATCC GGGCGAGATC ACGCCTTTGG TGCGGCTGGT GCGCCCGCAT
GTGGCCATCG TCACCACGGT GGAGCCGGTG CACATCGCCC AGTTCTCGTC CATCGAGGAG
ATCGCCGACG CCAAGGCGGA GATCTTCGAC GGGGTGGAGC CGGGCGGGGC AGCGGTGCTG
AACCTCGACA ATCCCCTGTT CGACCGCCTG AAGGCGGCGG CCGCCGCGCG CGGCATCTCC
CGCATCGTCA GCTTCGGCTC CGGCGAAGGC GCCGACGTGC GGCTGAAGGA TGCCGCGCTG
AAATCCTATT GCTCGGTGGC GGTGGCGGAC GTGATGGGCA CGCCGGTCAC CTTCAAGGTG
GGCATGCCCG GCCGCCACAT CGTGCAGAAC ATGCTGGCGG TGCTCGCCGC CGCCAAGCTC
GCCGGCGCCG ACATGGCGCT CGCCGCCCTC GCCCTGTCGC ACCTCAAGCC GCCGCCGGGG
CGCGGCGTGC CGCTCCAGCT CCAGCTGAAG GGCGGCCAGG CCACCCTGCT GGACGAGAGC
TACAACGCCA ATCCCGCCTC CATGCGCGCC GCCCTCGACG TGCTCAGCCG CACCCCGGTG
GGGCCGCGCG GCCGGCGCAT CGCGGTGCTG GGCGACATGC TGGAACTGGG TCCGGACGGT
GAGGCGCACC ACGCCGGCCT CGCCGAGGCC ATCGTCGCGG CGAAGATCGA TCAGGTCTAT
TGCTGCGGAC CCCAGATGCA TGCCCTGTGG CAGGCGCTCC CCTCGGAACG GCGGGGCGGC
TATGCCATCC ACGCCACCCA CCTCGAACCC ATGGTGGCCG CCGCCATCCG CGTCGGCGAC
ACGCTCATGG TGAAGGGATC CAACGGCAGC CGCATGGGAC CCTTGGTCAA GAAGCTCGCC
GAGCGCTTCC GCGCCGGCGA GGACGCGCTG CTCGAAGGAT AA
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| Protein sequence | MGAGFAGGSG MNMSAGMSGR VLHTVGEMVE ATGAAVRGAP HDVTGISIDS RTLVPGDAFF
AITGENSDGH AYVEKALGAG AALCVVARDR ADGFPADAPL LVVDDVLAAL TDVARAARAR
SKAQIVAVTG SVGKTTTKEA LRIALGADGE THASAASYNN HWGVPLSLAR FPREARYGVF
EIGMNHPGEI TPLVRLVRPH VAIVTTVEPV HIAQFSSIEE IADAKAEIFD GVEPGGAAVL
NLDNPLFDRL KAAAAARGIS RIVSFGSGEG ADVRLKDAAL KSYCSVAVAD VMGTPVTFKV
GMPGRHIVQN MLAVLAAAKL AGADMALAAL ALSHLKPPPG RGVPLQLQLK GGQATLLDES
YNANPASMRA ALDVLSRTPV GPRGRRIAVL GDMLELGPDG EAHHAGLAEA IVAAKIDQVY
CCGPQMHALW QALPSERRGG YAIHATHLEP MVAAAIRVGD TLMVKGSNGS RMGPLVKKLA
ERFRAGEDAL LEG
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