Gene Xaut_1776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_1776 
Symbol 
ID5421811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp2002604 
End bp2003971 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content70% 
IMG OID640881024 
Producttwo component, sigma54 specific, Fis family transcriptional regulator 
Protein accessionYP_001416678 
Protein GI154245720 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.227849 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.279906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATG TCGCCTTCAT CGACGATGAC GACCTGCTGC GCGCCGCCAA TGTGCAGGCG 
CTGATGCTGG CCGACCTCAC CGTCACCGGC TACGGCTCGG CGCTGGCCGC GCTGGAGGAG
ATCGGCGCCG ACTTTCCCGG CGTCGTGGTC AGCGACGTGC GCATGCCGGG GATCGACGGG
CTGGAATTGT TCCGGCGGCT GCGGCGGATT GATCCCGACC TGCCGGTCAT CCTCATCACC
GGCCACGGCG ACATCGCCAT GGCGGTGGAT GCCATGCGCG AGGGCGCCTA CGATTTCCTC
GCCAAGCCCT ATGCCAACGA CCGCCTCCTC ACCAGCGTGC GCCACGCCCT CGACCGCCGG
CGCCTGGTGC TGGAAAACCG CGACCTGAAG CGCTCGGTGG AGGCGGCAAG CGAGGACATG
CCCCTTTTGG GCACCACCCC GGTGATGGCG CGCATGCGCC AGATGCTACG CCAGATCGCC
GATGCCGACG TAGACGTGCT GGTGGAGGGC GAGACCGGCT CCGGCAAGGA GGTGGTGGCG
AATGCGCTCC ACCGCTGGAG CCGCCGCGCC GCACGGCCGT TCGTCGCGGT CAATTGCGGC
GCGCTGCCGG AAAACGTCAT CGAGAGCGAA TTGTTCGGCT ACGAGGCCGG CGCCTTCACC
GGCGCGCTCA AGAAGCGGGT CGGGCGCATC GAGCACGCCA ATGGCGGCAC CCTCTTTCTC
GACGAGATCG AGGCCATGTC GCCAGCCTTG CAGGTGAAGC TGCTGCGGGT TCTGGAAGCC
CGCGAGATCG CGCCGCTCGG CACCAACGAC ACCCGGCGCG TGGACATCCG CGTGGTAGCC
GCCTCCAAGG TGGACCTGCC GGCGCTGGTG CGCCAGGGCG CCTTCCGGGA GGACCTCTAT
TATCGCCTGC ACGTGGCCGG CGTGCGGATT CCCGCCCTGC GGGAGCGGCG GGCGGACGTG
CCGCTGCTGT TCGGCCATTT CCTCGCCCGC GCGGCCGAGC GCTTCAACCG GCCGCCGCCG
GAGCTCGACG CCGCCGTGCG CAAGCATCTG GCCGAGCACG ACTGGCCCGG CAACGTGCGC
GAGCTGGTGC ATTATGCCGA GCGGGTGGCA CTGGGGCTGG TGGACGACCT CACGGCGGAC
GTCGGGGCGG ATCTGGGCGC GCCGGGCGGG CTGACGGACG GCACGCTTCC GGAGCGGGTG
GACCGTTTCG AGGCCGGCGA GATCCGCGCC GCGCTGGAAG CCAACCAGGG CGACATCCAG
GCCACGGTGG CGGCCCTCGG CATTCCGCGC AAGACCTTCT ACGACAAGCT GCGCCGCCAC
GGCATCGACC AGTCCGCCTA CCGCCCCACC CGCCAGACCG CGCGGTGA
 
Protein sequence
MSDVAFIDDD DLLRAANVQA LMLADLTVTG YGSALAALEE IGADFPGVVV SDVRMPGIDG 
LELFRRLRRI DPDLPVILIT GHGDIAMAVD AMREGAYDFL AKPYANDRLL TSVRHALDRR
RLVLENRDLK RSVEAASEDM PLLGTTPVMA RMRQMLRQIA DADVDVLVEG ETGSGKEVVA
NALHRWSRRA ARPFVAVNCG ALPENVIESE LFGYEAGAFT GALKKRVGRI EHANGGTLFL
DEIEAMSPAL QVKLLRVLEA REIAPLGTND TRRVDIRVVA ASKVDLPALV RQGAFREDLY
YRLHVAGVRI PALRERRADV PLLFGHFLAR AAERFNRPPP ELDAAVRKHL AEHDWPGNVR
ELVHYAERVA LGLVDDLTAD VGADLGAPGG LTDGTLPERV DRFEAGEIRA ALEANQGDIQ
ATVAALGIPR KTFYDKLRRH GIDQSAYRPT RQTAR