| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1762 |
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| Symbol | |
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| ID | 5420876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 1987108 |
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| End bp | 1989270 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640881009 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_001416664 |
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| Protein GI | 154245706 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.654069 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.115232 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCGC CCAAATCGAC CGCGCCCGCT TCGACCGCCG CCACCTTCCG CGCCATCCCG
GTCGACGACC TCTCCCCGGC CGAGGCCGCG AGCGAGCACA AGGCCCTGGC GCAGGAGATC
ACCGGCCACG ACGCCGCCTA TTACCGCGAG GACGCCCCTG TCGTCTCGGA CGCCGAATAC
GACGCCCTGC GCCACCGCTA TGAGGCCATC GAGGAGCGTT TTCCGGGATT GAGGGGCGAG
GACAGCCTGT CGGAGAAGGT GGGCGCGGCG CCGTCGGAGA AGTTCGGCAA GGTTGCCCAC
AAGGTTCCCA TGCTGTCGCT GGCCAACTGC TTCTCCGACG AAGAGGTGGT GGAGTTCGTG
GCGCGGGTGA AGCGCTTCCT CAATCTCGGG CCGGACGACG AGGTGGCCTT CACCTGCGAA
CCCAAGATCG ACGGCCTGTC GTGCTCCCTG CACTATGAGA ACGGGCGCCT CACCGTGGCC
GCCACCCGGG GCGACGGCAG CCAGGGCGAG GACGTGACGC AGAATGTGCG CACCATCGCC
GACATCCCCG AGCGCCTCGC TGGAAAGGGC GTGCCGCAGA CCATCGACGT CCGCGGCGAG
GTCTACATGG CCAAGGCAGA CTTCGAGGCG CTGAACGCCC GGCAGGCGGC GGCGGAGGAG
AAGGTGTTCG CCAATCCGCG CAACGCCGCC GCCGGCTCCC TGCGCCAACT CGACTCGTCC
ATCACTGCCT CCCGGCCGCT GAAATTCTTC GCCTATGCCT GGGGCGAGGC CTCGGACCTT
CCCGCCGAGA CCCAGTTCGG CGTGGTGGAG GCGTTCGCCC GCTGGGGCTT CACCACCAAC
CCGCTCATGG TGGTGGCGAA GGACGCCGCC GGGCTCATCG CCCATTATCG TTCCATCGAG
GCGCAGCGGG CGCTGCTGGG CTACGACATC GACGGCGTGG TCTACAAGGT GAACAGCCTG
GAGCTGCAGC GCCGGCTCGG TTTCGTTTCC CGCTCGCCGC GCTGGGCCAT CGCCCACAAG
TTCCCGGCCG AGCAGGCCAC CACCGTGCTG GAGGATATCG AGATCCAGGT GGGCCGCACC
GGCGCCCTCA CCCCGGTGGC GAAGCTCACC CCGGTGACGG TGGGCGGCGT GGTGGTGTCT
TCCGCCACCC TGCACAACGA AGACGAGATC GCCCGCAAGG ACGTGCGCAT CGGCGACACG
GTGGTGGTGC AGCGCGCCGG CGACGTGATC CCCCAGGTGG TGCGGGTGAT CGAGGAGAAG
CGCCCGGCCG GATCGAAGCC GTATGAGTTT CCCACGCACT GCCCGGCCTG CGGCTCCCAT
GCCGTGCGCG AGGTGGATAC CAAAAGCGGC AAGGTGGACG CGGTGCGCCG CTGCACCGGC
GGCCTCATCT GCCCGGCGCA GATGGTGGAG CGGCTGCGCC ATTTCGTGTC GCGCAACGCC
TTCGACATCG AGGGGCTGGG CGAGAAGCAG GTGCGCGCCT TCTATGAGTG GGGGCTGATC
GCCTCCCCCG CCGACATCTT CACCCTGGAG ACGCGCAACG CCCGTTCGCT GCAGCGGCTG
GAGAACCGCG ACGGCTGGGG CAAGACCTCC GCCGCCAACC TGTTCGCCGC CATTGCCGAG
CGGCGCACCG TGGCGGTGGA TCGCTTCGTC TTCGCGCTGG GCATCCGCCA TGTGGGCGAG
ACCAACGCCA AACGCCTCAT GCGCCACTAC GGCACCGTGG AAGCGCTGGA AGCCGGAGCG
CTGGCGGCGG TCATCCCCGG CGAGGAGCAT CCCAAGGGCA ACGAGGCCTG GCAGGAGATG
ATCGGCATCG ACGGCATCGG CGACGTGGTG GCGGAGGCCG TCATCGAATT CTTCGGCGAG
CCCCGCAACC GCGAGGTGGT GACCGCCCTG CTGAAGGAGG TCACGCCTGA GCCCATGGAG
CAGGTGGCGG CGGCAAGCCC CGTCTCCGGC AAGACCGTGG TGTTCACCGG CTCGCTGGAG
AAGATGACCC GCGATGAGGC GAAAGCCATG GCGGAGCGCC TCGGCGCCAA GGTGGCCGGC
TCGGTGTCGG CCAAGACCAA CCTGGTGGTG GCCGGCCCCG GCGCCGGCTC CAAGCTGGAG
AAGGCGCAGG CGCTCGGCGT GCAGGTCATC ACCGAGGACG AATGGTTCGA GCTGGTGGGG
TGA
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| Protein sequence | MTAPKSTAPA STAATFRAIP VDDLSPAEAA SEHKALAQEI TGHDAAYYRE DAPVVSDAEY
DALRHRYEAI EERFPGLRGE DSLSEKVGAA PSEKFGKVAH KVPMLSLANC FSDEEVVEFV
ARVKRFLNLG PDDEVAFTCE PKIDGLSCSL HYENGRLTVA ATRGDGSQGE DVTQNVRTIA
DIPERLAGKG VPQTIDVRGE VYMAKADFEA LNARQAAAEE KVFANPRNAA AGSLRQLDSS
ITASRPLKFF AYAWGEASDL PAETQFGVVE AFARWGFTTN PLMVVAKDAA GLIAHYRSIE
AQRALLGYDI DGVVYKVNSL ELQRRLGFVS RSPRWAIAHK FPAEQATTVL EDIEIQVGRT
GALTPVAKLT PVTVGGVVVS SATLHNEDEI ARKDVRIGDT VVVQRAGDVI PQVVRVIEEK
RPAGSKPYEF PTHCPACGSH AVREVDTKSG KVDAVRRCTG GLICPAQMVE RLRHFVSRNA
FDIEGLGEKQ VRAFYEWGLI ASPADIFTLE TRNARSLQRL ENRDGWGKTS AANLFAAIAE
RRTVAVDRFV FALGIRHVGE TNAKRLMRHY GTVEALEAGA LAAVIPGEEH PKGNEAWQEM
IGIDGIGDVV AEAVIEFFGE PRNREVVTAL LKEVTPEPME QVAAASPVSG KTVVFTGSLE
KMTRDEAKAM AERLGAKVAG SVSAKTNLVV AGPGAGSKLE KAQALGVQVI TEDEWFELVG
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