| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1740 |
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| Symbol | |
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| ID | 5423745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 1957181 |
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| End bp | 1958449 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640880987 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001416642 |
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| Protein GI | 154245684 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.309969 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.840232 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCATT TCGACTACCG CAACGGCCGC CTTTTCGCCG AGGACGTGGA CATCACCCCC
CTCGCCGCCG AGGTGCGCAC CCCCTTCTAT TGCTATTCCA GCGCCACCCT GGAACGTCAC
TACCAGGTGT TCATGGAGGC GTTCAGCGGC CGCGACGTGC TGCTGTGCTA CGCCCTGAAG
GCCAATTCCA ACCAGTCAGT CATCGCAACG CTGGCCCGGC TCGGCGCGGG GGCGGACATC
GTCTCCGCCG GCGAGCTGGC GCGCGCCCGT GCCGCCGGCG TGCCGGCGGA GCGCATCGTC
TTCTCCGGCG TGGGCAAGAC CCGCGAGGAG ATGGCGGCGG CGCTGGACGG CGGCATCCTG
TGCTTCAACG TGGAGAGCGA GCCCGAGCTT GCGGCCCTCT CCGAGGTGGC GACCGCCATG
GGGGTGAGCG CCCCGGTCTC CATCCGCGTC AACCCGGACG TGGACGCCAA GACCCACAAG
AAGATCTCCA CCGGCAAGTC CGCCACCAAG TTCGGCATTC CCATCTCGCG GGCCCGCGAG
GTCTACGACT ATGCCGCGCG CCTGCCCGGC CTCGCCATCA CCGGCGTGGA CATGCACATC
GGCAGCCAGA TCACCGACAT GGCGCCCTTC GACAATGCGG TGACATTGCT GGCGGAACTG
GCGCGCGACC TGCTCGCGGC GGGCCACAGG CTGCACCACA TGGATCTCGG CGGCGGGCTC
GGCGTGCCCT ACGCCGCCTC CGACCCGGTG CCGCCGCCGC CCAGCGCCTA TGCTGAGGTG
GTCAGCCGCG CCCTCGGCGA CCTGAAGCTG CCGCTGGTGT TCGAGATGGG CCGCATGCTG
GTGGCCAATG CCGGCATCCT CGTCACCAGG GTGATCTATG TGAAGGAGGG CGAGGGCAAG
ACCTTCGTGG TGGTGGACGC CGCCATGAAC GACCTCATCC GCCCCACCCT CTACGAGGCG
CACCACGACA TCATTCCCGT GGTCGAGCCG GCGGCCGATG CACCGCTGGT GGTGGCGGAC
GTGGTGGGAC CGGTGTGCGA GACCGGCGAT TTCCTCGCCC TCGACCGTCC GCTGCCGCGC
CTGAAGGCCG GCGACCTGCT GGCGGTGATG ACGGCCGGCG CCTATGGCGC GGTGCAGGCG
AGCACATACA ATACCCGTCC GCTGGTGCCG GAGGTGCTGG TGCGCGGCGC GGCGGCGGCC
GTGGTGCGGC CGCGCCTGGA GGTGGCCGAC CTCATCGCCC TCGACCGCCC CGCGCCCTGG
CTGGCCTGA
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| Protein sequence | MHHFDYRNGR LFAEDVDITP LAAEVRTPFY CYSSATLERH YQVFMEAFSG RDVLLCYALK
ANSNQSVIAT LARLGAGADI VSAGELARAR AAGVPAERIV FSGVGKTREE MAAALDGGIL
CFNVESEPEL AALSEVATAM GVSAPVSIRV NPDVDAKTHK KISTGKSATK FGIPISRARE
VYDYAARLPG LAITGVDMHI GSQITDMAPF DNAVTLLAEL ARDLLAAGHR LHHMDLGGGL
GVPYAASDPV PPPPSAYAEV VSRALGDLKL PLVFEMGRML VANAGILVTR VIYVKEGEGK
TFVVVDAAMN DLIRPTLYEA HHDIIPVVEP AADAPLVVAD VVGPVCETGD FLALDRPLPR
LKAGDLLAVM TAGAYGAVQA STYNTRPLVP EVLVRGAAAA VVRPRLEVAD LIALDRPAPW
LA
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