| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1680 |
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| Symbol | rplD |
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| ID | 5424569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 1897902 |
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| End bp | 1898522 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640880926 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_001416582 |
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| Protein GI | 154245624 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.097299 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000499421 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGAAATCA CCGTCAAGAC GCTCGACGGC ATCGAGGCCG GTTCCGTGAC CCTGTCGGAC
GAGATCTTCG GTCTCGAGCC GCGGGCGGAC ATCCTGCACC GGTGCGTGAC CTGGCAGCTG
TCGCGCCGTC AGGCCGGCAC CCACCGCACC AAGGGCCGTT CGGAGATCAA CCGCACGTCC
AAGAAGATGT ACAAGCAGAA GGGCACCGGC AACGCCCGTC ACGGCGCCGC CTCCGCTCCG
CAGTTCCGCG GCGGTGGTCG TGCCTTCGGT CCGGTCGTGC GCTCCCACGC CATCGACCTG
CCGAAGAAGG TGCGCGCGCT CGCCCTGAAG CATGCCCTGT CTTCGAAGGC CAAGGCGGCG
CAGATCATCG TGCTCGACAA GGTCTCCCTT GACGATCCCA AGACGAAGGC GCTCAAGGAG
CACTTCGCCA AGCTGGGTCT CGAATCGGTC CTGATCGTGG ACGGTGCCCA GGTGGAGCAG
AATGTGGCGC TCGCGGCGCG CAACCTGCCC TATGTGGACG TGCTCCCGAT CCAGGGCATC
AACGTCTATG ACATCCTGCG CCGCGACACC CTGGTCCTGA CCAAGGCCGC CGTGGACGCG
CTGGAGGCGC GCTTCAAATG A
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| Protein sequence | MEITVKTLDG IEAGSVTLSD EIFGLEPRAD ILHRCVTWQL SRRQAGTHRT KGRSEINRTS
KKMYKQKGTG NARHGAASAP QFRGGGRAFG PVVRSHAIDL PKKVRALALK HALSSKAKAA
QIIVLDKVSL DDPKTKALKE HFAKLGLESV LIVDGAQVEQ NVALAARNLP YVDVLPIQGI
NVYDILRRDT LVLTKAAVDA LEARFK
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