| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1679 |
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| Symbol | rplC |
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| ID | 5424568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 1897177 |
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| End bp | 1897902 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640880925 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_001416581 |
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| Protein GI | 154245623 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.123125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000530368 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCGGTCAG GCGTCATCGC CCAGAAGGTC GGCATGACCC GCATCTTCAC CGATGCCGGT
GAGCACGTGC CGGTCACTGT GCTGAAAGTT GAGAGCTGCC AGGTGGTTGC CCACCGTACG
CTCGACAAGA ACGGTTATGT CGCGGTCCAG CTTGGCGCTG GCCGTCGCAA GCCCAAGAAT
GTGACCCGCG CCGAGCGCGG CCACTTCGCG GTTGCCCAGG TTGAGCCCAA GCACAAGCTC
GCCGAGTTCC GCGTGCCGGA AGAGGCGCTG ATCCCGGTCG GCGCCGAGAT CACGGCTGAC
CACTTCGTCG TGGGCCAGTA CGTGGACGTC ACCGGCACCA CCATCGGCAA GGGCTTTGCC
GGCGGCATGA AGCGCCACAA TTTCGGTGGT CTTCGCGCCA CCCACGGCGT GTCCATCTCG
CATCGTTCGA TCGGTTCGAC CGGCGGCCGT CAGGACCCGG GCAAGACCTT CAAGAACAAG
AAGATGCCTG GCCACATGGG TGACGTCACC GTCACCACCC AGAACCTCAA GGTCGTCATG
ACCGACGTCG AGCGCGGCCT CATCGCCGTC GAAGGCGCCG TTCCCGGCCA TGCGGGCGGC
TGGATCACCG TGCGCGACGC GGTGAAGAAG AAGCTGCCTG CCGAGGCTCC CAAGCCCGGC
GCGTTCAAGC TGAACGGGTC CGAAGCGGCT CCCGCCGCCG AAGCCGTCAA TGAGGAGGGC
GCGTGA
|
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| Protein sequence | MRSGVIAQKV GMTRIFTDAG EHVPVTVLKV ESCQVVAHRT LDKNGYVAVQ LGAGRRKPKN
VTRAERGHFA VAQVEPKHKL AEFRVPEEAL IPVGAEITAD HFVVGQYVDV TGTTIGKGFA
GGMKRHNFGG LRATHGVSIS HRSIGSTGGR QDPGKTFKNK KMPGHMGDVT VTTQNLKVVM
TDVERGLIAV EGAVPGHAGG WITVRDAVKK KLPAEAPKPG AFKLNGSEAA PAAEAVNEEG
A
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