| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1657 |
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| Symbol | |
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| ID | 5424647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 1875920 |
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| End bp | 1877905 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640880903 |
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| Product | cytochrome c-type biogenesis protein CcmF |
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| Protein accession | YP_001416559 |
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| Protein GI | 154245601 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1138] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.018137 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.790644 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCGG AAATCGGCCA GTACGCCCTC GCCCTCGCCT TCGCCCTCTC GCTGGCGCAG
GTGCTGCTGC CGTCCTGGGG CGCGCGGCGC AACGACCCGG TGCTGATGGG CTCGGCCGGC
CCCATCGCGC TGGCCCTGTT CGGCTTCATC TCCTTCGCCT TCGGCGCTCT GGTGCAGCTC
TATGTCACCT CGGACTTCAC CGTGGTGAAC GTGGCCGAGA ATTCCCACTC CCAGATGCCG
CTGATCTACA AGATCACCTC GACCTGGGGG AACCACGAGG GCTCCATGCT CCTGTGGGTG
TTCGTGCTGT CTTTCTTTGG CGCGCTGGTG GTGCTGTTCG GCACCAACCT GCCGGATCGG
CTGAAGGCGC TGGTGCTGGC GGTGCAGGGG GCGGTGGCGG CGGCCTTCCT CTCGTTCATC
CTGTTCACCT CCAACCCCTT CGCGCGCCTG GTGCCGGCGC CGGCGGAGGG GCGCGACCTC
AACCCCATCC TCCAGGACCC TGGCCTCGCC ATCCACCCGC CGCTGCTCTA TCTCGGCTAT
GTGGGGCTCT CCGTCTCCTT CGCCTTCGCC ATCGCGGCGC TGATCGAGGG GCGGATCGAC
GCGGCCTGGG CGCGCTGGGT GCGGCCGTGG ACGCTCGCCG CCTGGATCTT CCTGACGCTC
GGCATCGCCA TGGGCTCCTA CTGGGCCTAT TACGAACTGG GCTGGGGCGG CTGGTGGTTC
TGGGACCCGG TGGAGAACGC CTCCCTCATG CCGTGGCTCG CGGCAACCGC GCTGCTGCAT
TCCGCCGTGG TGATGGAGAA GCGCGACGCC CTGAAGGTGT GGACCATCCT CCTCGCCATT
CTCGCCTTTT CGCTCTCGCT GGTGGGCACC TTCCTGGTGC GCTCGGGGGT GCTGACCTCG
GTGCACGCCT TCGCCACCGA TCCGGCGCGG GGCGTGTTCA TCCTCGCCAT CCTCACCTTC
TTCATCGCCG GCGGGCTGAC CCTGTTCGCG TTCCGCGCCT CCGAGCTGAA GCAGGGCGGG
CTGTTCGCGC CCATCTCGCG GGAGGGGGCG CTGGTCCTCA ACAATCTGTT CCTCACCGCC
GCCACCGCCG CGGTGCTGGT GGGCACCCTC TACCCGCTGG CGCTGGAAGC GCTGACCGGG
GACAAGATCA CGGTGGGGCC GCCCTACTTC AACCTCGCCT TCGGCGGGCT GATGGTGCCG
CTGGTGTTCG CCATGCCGTT CGGCCCGCTG CTGGCCTGGA AGCGCGGCGA CCTCATGGGC
GTCGCCCAGC GCCTGATGAT GGCCGCCGCC CTTGCGGTGG TGGCCGCCGT GGTCATCGCC
GCCGCCACCA CGGGCGGGCC GGTGCTGGCG CCGCTGGTGG TGGGGCTCGC GGTCTTCATC
ATGCTGGGGG CGCTCACCGA CATCGCCGAG CGCGCGGGCC TCGGGCGGGT GACGGCGCGG
GTGGCGGTGG CGCGTCTCGC CGGGACGCCG CGCTCCGCTT ATGGCACTGC CATCGCCCAT
TTCGGCGTCG GGGTGTGCCT GCTCGGCATC GTGTGCGAGA CCGGCTGGAG CCTGGAGAAG
ATCGCCTCCG TGAAGCTTGG CGACACCGTC ACCATCGGTG CCCGCAGCCT CACCCTCGAC
CGGCTGGAAA ACCGCACCGG CGCCAACTTC CGCGCCCGCA CGGCGGTGTT CTCCATCCGC
GAGGATGGCG AGTCGCAGGG CACCATCGAG GCCTCGCGCC GCATGTTCGC GGCCCGGCAG
ATGGCCACCA CCGAGGCCGG CATCCGCACC TTCGGCCTCA GCCAGCTCTA TGTGAGCATG
GGCGAGGAGA GCCCGGACGG GCACATCTCC ATGCGCGCCA CCTACAAGCC GTTCGTGACG
CTGATCTGGC TCGGGGCGGT GGTGATGGCG CTGGGCGGCG CGCTCTCGCT GGCCGACCGG
CGCCTGCGCG TCGGCGCCCC CCGCCCCGCC ACCAAGCGCC CCCGCGCCCC GGTGCCGGCG
GAGTGA
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| Protein sequence | MIAEIGQYAL ALAFALSLAQ VLLPSWGARR NDPVLMGSAG PIALALFGFI SFAFGALVQL
YVTSDFTVVN VAENSHSQMP LIYKITSTWG NHEGSMLLWV FVLSFFGALV VLFGTNLPDR
LKALVLAVQG AVAAAFLSFI LFTSNPFARL VPAPAEGRDL NPILQDPGLA IHPPLLYLGY
VGLSVSFAFA IAALIEGRID AAWARWVRPW TLAAWIFLTL GIAMGSYWAY YELGWGGWWF
WDPVENASLM PWLAATALLH SAVVMEKRDA LKVWTILLAI LAFSLSLVGT FLVRSGVLTS
VHAFATDPAR GVFILAILTF FIAGGLTLFA FRASELKQGG LFAPISREGA LVLNNLFLTA
ATAAVLVGTL YPLALEALTG DKITVGPPYF NLAFGGLMVP LVFAMPFGPL LAWKRGDLMG
VAQRLMMAAA LAVVAAVVIA AATTGGPVLA PLVVGLAVFI MLGALTDIAE RAGLGRVTAR
VAVARLAGTP RSAYGTAIAH FGVGVCLLGI VCETGWSLEK IASVKLGDTV TIGARSLTLD
RLENRTGANF RARTAVFSIR EDGESQGTIE ASRRMFAARQ MATTEAGIRT FGLSQLYVSM
GEESPDGHIS MRATYKPFVT LIWLGAVVMA LGGALSLADR RLRVGAPRPA TKRPRAPVPA
E
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