| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1655 |
|---|
| Symbol | |
|---|
| ID | 5424738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 1874217 |
|---|
| End bp | 1875440 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640880901 |
|---|
| Product | tetratricopeptide TPR_4 |
|---|
| Protein accession | YP_001416557 |
|---|
| Protein GI | 154245599 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4235] Cytochrome c biogenesis factor |
|---|
| TIGRFAM ID | [TIGR03142] cytochrome c-type biogenesis protein CcmI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.970184 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCTATG CAGCCATGCT TTCACCCGCT AACGGCTCTG AGGTGATGAT CTCACTGTCC
CTGTTCGCAG CCTTTGCGCT CATGACCGCC CTCGCGGCGC TCGCCGTGCT GTGGCCCCTG
TCGCGCGTCC GCGCCGCGCG GGCCGCGCAT GATGCCGACC TTGCGGTCTA TCGCGACCAG
CTCGCCGAGA TCGCCCGCGA CGCCAAGTCC GGCCGCCTGC CCAAGGCCGA GGCGGAAGCC
GCGCGCATCG AGGTGGCGCG GCGCATGCTC GCGGCCGATT CCGCCCAGCA GGCGGCTGCG
ACCGGGGATC CGGCGCGGGT GACGCGCCAG ACCACATGGC GCCGTCGCGC CGCCGCCGTG
TTCGCCCTGC TGTTCATTCC GGTGTTCGCG GCCAGCCTCT ATGGCCTGCT CGGCTCGCCC
CGCCTTCCCG GCGCGCCTTT GGCCGAGCGC CTGACGGCGG CGCCCGATCG CAGCGATGTC
GCCATCCTGG TGCGGCGGGT GGAGGAGCAT CTCCAGAAGA ATCCCAATGA CGGGGCGGGC
TACGAGATCC TGGCGCCGGT CTATCTGCGC ATGGGACGGC CGGAGGATGC CGCCCGCGCC
TATGCCGAGG CCATCCGCAT TCTCGGACCC TCCGCTGCGC GCCATTCGTC GCGGGGCGAA
GCGTTGGTGG TCGCCTCCGA CGGCCTGGTG ACGGCCGATG CCGCCCGCGC CTTCACCGAT
GCGCTGGCCC TCGACCCCAA TGAGCCGCGC TCGGCCTATT TCCTCGGCCT CGCCGCCGAG
CAGGATGGCC GCGCCGAGGA TGCGGCACGA ATCTGGGGCC AGCTGCTTGC CCGCACGCCT
GCCAATGCGC CCTATCGGCC GGTGGTGGCG GCGGCCCTCG CCCGGGTGGG CGGCACGGCT
TCGGCGGCCG CGGCTGCGCC GGCCCAGCCC GGTCCGGCAG CGGCGGATGT GGCGGCGGCG
GCCTCCATGT CGTCCGACGA GCGCAACGCC ATGGTTCGTG GCATGGTGGC CCGCCTCGCC
GAGCGGCTGG ACGCCGAGCC CAACGATATC GAGGGCTGGC TGCGCCTGGT GCGGGCCTAT
GGCGTGCTCG GCGACAAGGA CAAGGCGGCG GAGGCCCTGA AAAAGGCACG TGCAGCCTTC
AAGGACAATG CAGAAGCTCT CGGGCGGCTC GATGCCGCCG AGAAGGAGCT CGCGGCAAGG
ACGGGAGCGG GAGAAAAAGG ATGA
|
|---|
| Protein sequence | MAYAAMLSPA NGSEVMISLS LFAAFALMTA LAALAVLWPL SRVRAARAAH DADLAVYRDQ
LAEIARDAKS GRLPKAEAEA ARIEVARRML AADSAQQAAA TGDPARVTRQ TTWRRRAAAV
FALLFIPVFA ASLYGLLGSP RLPGAPLAER LTAAPDRSDV AILVRRVEEH LQKNPNDGAG
YEILAPVYLR MGRPEDAARA YAEAIRILGP SAARHSSRGE ALVVASDGLV TADAARAFTD
ALALDPNEPR SAYFLGLAAE QDGRAEDAAR IWGQLLARTP ANAPYRPVVA AALARVGGTA
SAAAAAPAQP GPAAADVAAA ASMSSDERNA MVRGMVARLA ERLDAEPNDI EGWLRLVRAY
GVLGDKDKAA EALKKARAAF KDNAEALGRL DAAEKELAAR TGAGEKG
|
|---|
| |