Gene Xaut_1578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_1578 
Symbol 
ID5422575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp1790025 
End bp1791233 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content65% 
IMG OID640880825 
ProductABC transporter substrate-binding protein 
Protein accessionYP_001416482 
Protein GI154245524 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.803505 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGACATG GCATGATCAT GGGCCTCGTC GCGCTGCTGG CGACGACCAT CGCCGCATCC 
GCGCAGGCGC CGAAAACCGT CAAGATCGGG GTTCTCAACG ACCAGTCGGG CCCCTACTCC
GACCTGGGCG GCATCGGATC GGTGGTGGCG GCTCAGATGG CCGTCGAGGA TTCCGGCCTC
AGCCAGAAGG GCTGGACCAT CGAGGTGCTC TCGGCCGACC ACCAGAACAA GGCCGACATC
GCCGCCAGCG TCGCCCGCCA ATGGTACGAC GTGGACGGCG TCGACATGAT CACCGACCTC
ACCAATTCCG CCGCCGCCCT CGCGGTGAAC GAGATCACCC GCGACAAGAA CAAGGTCATT
CTGGCCTCGG GGGCGGCAAC CTCAGACCTC ACCGGCAAGG CGTGCTCTCC CAATACGGTA
CACTGGACCT CCGACACCTG GGCGTTCGCC CACGGAACCG GCCAGGCCAT CGTGAAGACC
GGGGGCGACA CCTGGTTCTT CCTCACCGCC GACTATTCCT TCGGCCAGGC CCTGGAGCGC
GACACCGCCG CGGTGGTGGA AGAGTACGGC GGCAAGGTGA TCGGCCGGGT CCGGGTGCCC
CTCGACACGG CCGATTTCTC GTCCTTCCTG CTGCAGGCGC AGAGCTCCAA GGCGAAAATC
GTCGGCCTTG CCAATTCAGG GGCCGACACC ACCAATTCCA TCAAGCAGGC GGCGGAATTC
GGCATCGTCT CGGGCGGCCA GAACATTGCC GGCCTTCTCA TCTACATCAC CGATGTGCAT
TCCATGGGCC TGCCCACGGC GCAGGGCCTG ATCCTGACCG CGCCCTTCTA CTGGGATTTC
AACGACGGCA CCCGGGCCTT CTCCGCGCGC TTCGCCGGCA AGATGCGCGG CACCAAGCCC
TCCATGGCTC AGGCCGGTGT CTATTCAGCC ACCCTCGCCT ATCTCAAGGC GGTGGCCGAA
CTCGGCTCAA GCCAGGACGG CAAGGCGGTC GTGGACAAGA TGAAGTCGGC GCCCATCAAG
GATGCCCTGT TCGGCGACGG CTTGATCCGC GAGGATGGGC GCAAGATCCA CAACATGTAT
CTTTTCGAGG TGAAGAAGCC GTCCGAGTCC AAGGCGCCGT GGGACTACTA CAGGCTGCGC
GCCACCATCC CCGCGGAAGA GGCCTTCCGC CCCCTCTCCG AGAGCGAGTG CCCGCTGGTG
AAGAAGTAG
 
Protein sequence
MRHGMIMGLV ALLATTIAAS AQAPKTVKIG VLNDQSGPYS DLGGIGSVVA AQMAVEDSGL 
SQKGWTIEVL SADHQNKADI AASVARQWYD VDGVDMITDL TNSAAALAVN EITRDKNKVI
LASGAATSDL TGKACSPNTV HWTSDTWAFA HGTGQAIVKT GGDTWFFLTA DYSFGQALER
DTAAVVEEYG GKVIGRVRVP LDTADFSSFL LQAQSSKAKI VGLANSGADT TNSIKQAAEF
GIVSGGQNIA GLLIYITDVH SMGLPTAQGL ILTAPFYWDF NDGTRAFSAR FAGKMRGTKP
SMAQAGVYSA TLAYLKAVAE LGSSQDGKAV VDKMKSAPIK DALFGDGLIR EDGRKIHNMY
LFEVKKPSES KAPWDYYRLR ATIPAEEAFR PLSESECPLV KK