| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1540 |
|---|
| Symbol | |
|---|
| ID | 5422493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 1750311 |
|---|
| End bp | 1751159 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640880788 |
|---|
| Product | transketolase domain-containing protein |
|---|
| Protein accession | YP_001416445 |
|---|
| Protein GI | 154245487 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3959] Transketolase, N-terminal subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.220485 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.477158 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATCG CAACTTCCGG CCACAACCGG CAGCTTGCCG AACGCGCGCA CGCCATCCGG
CGCCATGCGC TGCGCATGGG CGAGGTGCAG GGCCAGGGCT ACATCGCGCA GGCGCTCGGC
ATCTCCGACG TTCTGGCGGC AGCCTATTTC CATGCCATGA CCTATCGGGC CGAAGATCCG
GACTGGGAAG GACGCGACCG CTTCCTGCTG TCCAACGGGC ACTATGCCAT CGCGCTCTAT
GCGGCGCTGA TCGAGGCCGG CATCGTCCCT GAGGACGAGC TTGAGACCTA CGGCTTCGAC
GACAGCCGGC TGCCCATGTC GGGCATGGCC AGCTACACGC CGGGCATGGA GATGTCGGGC
GGCTCGCTCG GCCTTGGCCT CGCCATCGCT GTGGGCCGCT GCCTCGGCCT CAAGCGCAAA
GGCTCCGACC GCCACGTCTA CACCCTGTTC TCCGACGGTG AGTTGGACGA GGGCTCGGTG
TGGGAGGCCA TCATGTCGGC CGCCCACTTC CAGCTCGACA ACCTCATCGC CGTGGTGGAC
GTCAATAACC AGCAGGCCGA CGGGCCGTCC ACCTCGGTGC TCGGCTTCGA GCCGCTGAAG
GAGAAGCTGG AAGCCTTCGG CTGGTTCGTC TGCCGCGTGG ACGGCAACGA CCTCGAAGCG
GTGCGCAAGG CCTTCGATGC GTGCAAGGCG CAATCGGGCG GCGGCAAGCC CAGCATGATC
ATCGCCGACA CGCTGATGGG CAAGGGCGTG CCGTTCCTTG AGGCGCGCGA GAAGAACCAC
TTCATCCGCG TCGACGCCCA CGAGTGGCAA CTGGCGCTGG CCGCACTCGA CGAGGGGAAG
CCGTCATGA
|
|---|
| Protein sequence | MTIATSGHNR QLAERAHAIR RHALRMGEVQ GQGYIAQALG ISDVLAAAYF HAMTYRAEDP
DWEGRDRFLL SNGHYAIALY AALIEAGIVP EDELETYGFD DSRLPMSGMA SYTPGMEMSG
GSLGLGLAIA VGRCLGLKRK GSDRHVYTLF SDGELDEGSV WEAIMSAAHF QLDNLIAVVD
VNNQQADGPS TSVLGFEPLK EKLEAFGWFV CRVDGNDLEA VRKAFDACKA QSGGGKPSMI
IADTLMGKGV PFLEAREKNH FIRVDAHEWQ LALAALDEGK PS
|
|---|
| |