| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1510 |
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| Symbol | |
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| ID | 5422280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 1718185 |
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| End bp | 1720116 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640880758 |
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| Product | type I secretion system ATPase |
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| Protein accession | YP_001416415 |
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| Protein GI | 154245457 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTCT CGCCCGGCCA CCGGGGGCCT TCCCCCGCGC ACAAGCCGAC CGCGCTCGAT
CAGGCCCTGC GGGCCATCCG CCCCGCCTTC ATCGCCGTGA TCGTCTTCAG CTTCTTCATC
AACCTGCTGG GCCTCAACGG CTCGATCTAC ATGATGCAGG TCTACGACCG CGTGCTGTCC
TCCCGCAGCA TCGAGACGCT GATCCTGCTC ACCCTCATCA CCGCCTTCCT CTATGTGGTG
TGGTCGGCGC TGGAAGCGCT GCGCACGCGG GTGCTGGAGC GGGCCGGCTT CGCCTTCGAC
GCCAAGGTCC ACGTGCCGGT GTTCGACGCC ATCCAGCGCA CCGCGGTGCG CGACCGCAGC
TCCGGCCAGA CCCAGACCCT GCGCGACCTG GACACGGTGC GCGACTTCTT CGCCGGTCCC
GCCCTCAGCG CCCTGTGCGA CCTGCCGTGG ATGCCCATCT ACGCCATCTG CGCCACCCTG
CTGCATCCCT ACTACGGCTT TCTGGCGCTG GGCAGCGCGC TGCTCTCCGG CGCCCTCGCG
GTGCTCAACA ACCGGGCCAC CCAGCCCAGC CTCTCCGCCT CGAACCGCGC CAGCATCACC
GCCAGCACCC TGGCGACGGC GACCCTGCGC AATGCCGAGG TGCTGCAGGC CATGGGCATG
GCTCCCGAGC TGCGCCGGCG CTGGGGCGCC ATGCGCGAGC AGGCGCTGGG CTGGCAGGGC
CGGGCCGGTG ATCGCGGCAC CATCCTGGTG GCCCTCACCA AGTTCAACCG CGCCCTGGTC
CAGAGCGTGG TGCTCGGGCT CGGCGCCTAC CTCGCCATCC ACAAGGAGAT TTCCCCCGGC
ATGATCATCG CCGGCTCGAT CCTGGTGGGG CGCTGCATCC AGCCCATCGA GCTGGCGGTG
AGCAACTGGA AGTCGGTGGT GAACGTGCGC GCCGCCCACG CCCGCATCCA GCTTCTGCTG
GCTGAGGCGC CCGATCCCGG CAAGCGCCTG CGCCTGCCGG AGCCGCGCGG CGAGATCGCG
GTGGAGAACC TGTTCGTTCG CGCCCCCGGC CGCGATGTTC CGGTGCTGCG CAACGTGTCG
TTCCGCCTGC CGGCGGGCAC CGGGCTCGGC ATCGTCGGCC CCACCGCGGC CGGCAAGTCG
AGCCTGGCGC GGGCCCTGGT GGGGGTGTGG GCGGCGGTCG GCGGCTGCGT GCGGCTGGAC
GGCTCGGAGC TGGGCCATTG GGACGAGGCC CAGCTCGGCC GCGCCATCGG CTACCTGCCG
CAGGACGTGG AGCTGTTCTC CGGCTCCATC GCCGAGAACA TCGCCCGCTT CGGCGAGGTC
CACGACAGCG AGGTGGTGGC CGCCGCCCGC CTTGCCGGCG TGCATGACCT GATCCAGCAC
ATGCCGCAGG GCTACAACAC CCAGATCGGC GAGGGCGGCG TCGCCCTCTC GGGCGGGCAG
CGCCAGCGCA TCGGGCTGGC GCGGGCGGTG TTCGGCCTGC CGGCCCTGAT CGTGCTTGAC
GAGCCCAATT CCAGTCTCGA CCCGCCGGGC GAAGTGGCGC TCTCCGAGGC GCTGCGCCAG
CTCAAGGCGG CGGAGCGCAC GGTGGTGATC GTGACCCACC GCCCGGCGGT GCTCGGCCAG
TGCGACCTGA TCCTCGCGCT CGCGGACGGC ACGCCCCAGG CGTTCGGCCC GCGCGACGAA
ATGCTGAAGC GCCTGACCGG CGGCGCGCCG AAGCCCGGGG GCCCTCCCAC CGCCCAGCCC
GGGCCTCAGC CAGTGCCCCA GCCCGGGCCA CAGATGGGGC AGCAGCCGAT GTCCCAGCCG
GGGCCCCAGA TGGTCCGCAG CCGTCCGCCG CTGGCGAGCG TTCCCCTCGG GACGGCGGCG
AACGAAATCC CGCCCAATAT GCCCGGCGCC CCACGGCCCC CGTTCATGGA GGATGGCCAT
GCGGTTTCTT GA
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| Protein sequence | MSLSPGHRGP SPAHKPTALD QALRAIRPAF IAVIVFSFFI NLLGLNGSIY MMQVYDRVLS
SRSIETLILL TLITAFLYVV WSALEALRTR VLERAGFAFD AKVHVPVFDA IQRTAVRDRS
SGQTQTLRDL DTVRDFFAGP ALSALCDLPW MPIYAICATL LHPYYGFLAL GSALLSGALA
VLNNRATQPS LSASNRASIT ASTLATATLR NAEVLQAMGM APELRRRWGA MREQALGWQG
RAGDRGTILV ALTKFNRALV QSVVLGLGAY LAIHKEISPG MIIAGSILVG RCIQPIELAV
SNWKSVVNVR AAHARIQLLL AEAPDPGKRL RLPEPRGEIA VENLFVRAPG RDVPVLRNVS
FRLPAGTGLG IVGPTAAGKS SLARALVGVW AAVGGCVRLD GSELGHWDEA QLGRAIGYLP
QDVELFSGSI AENIARFGEV HDSEVVAAAR LAGVHDLIQH MPQGYNTQIG EGGVALSGGQ
RQRIGLARAV FGLPALIVLD EPNSSLDPPG EVALSEALRQ LKAAERTVVI VTHRPAVLGQ
CDLILALADG TPQAFGPRDE MLKRLTGGAP KPGGPPTAQP GPQPVPQPGP QMGQQPMSQP
GPQMVRSRPP LASVPLGTAA NEIPPNMPGA PRPPFMEDGH AVS
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