| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1509 |
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| Symbol | |
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| ID | 5422279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 1716783 |
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| End bp | 1718198 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640880757 |
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| Product | HlyD family type I secretion membrane fusion protein |
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| Protein accession | YP_001416414 |
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| Protein GI | 154245456 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGTTTC TTGAAAGCTG GTTCAGCCCC CGCGCCGCAC TGGCCGGAGC GGACATGGGA
GCTGCCGCCG GCGTGCGACC AACCACACCG GCTCCCCCGA CCGCACCGGG CGCGCCCCCG
CCGCCCTCGG GCGACTACAA TGCCATGGCC CGCATCGGCT ACGCCGTCAT CGCCTTCACC
TTCCTCGGTG TCAGCGGCTG GGCGGCGCTG GCCCGGGTGG ATAGCGCCGT CATCGCCCCC
GGCGTGGTGG CAGTGGAGAG CAAGCGGCAG GTGGTGCAGC ACCTGGAAGG CGGGATCGTC
GCGGAAATCC TCGTCAAGGA AGGCGAGGAG GTGGTGAAGG ACCAGGTGCT GTTCCGCCTC
GACCCGACCC AGTCCAAGGC CAGCGACGAC GCCGCACTGG CCCAGCTGCG CGCCGCCCTG
GCGCTGGAGG CGCGGCTGAT TGCGGAGCGG GACGAGCGGG AGCAGATCGT CTTTCCCGAC
GATCTCCTCG CCAATGCCGG CCAACCCGTG GTGCGCGACG CCATGGCCGA CCAGCTCACC
CAGTTCCGCG ACCGGCGCGC CGCCTTCAAG AGCCAGACCG GCATCCTGGA AAACCGCGCC
GAGCAGTCGG GCCACGAGAT CGAGGGCCTG ACGCAGGAGC GGCTCTCCGC CGAGCAGCAG
TTGATGTTCA TCGACGACGA GCTGGATTCC CTCCGCCAGC TGGAGCAGAA GCGGCTGGTG
AACAAGTCCC GCGTCTCCCA GATCGAGCGG GAGAAGGCGC GGCTCGAAGG CGTGGTCGGC
CGCAACACCG CCGACACCGC CAAGGTGCGC GGCTCCATCG GCGAACTCAC CATGCAGGTG
TCCCAGTTGC GCCAGCAGCG GGCCGAGGAC ATCGGCAAGC AATTGCTGGA GGTGCGCCAG
AGGATCGCCG AGCTGACCGA GAAGGTGCGG GTGACGCGCA ACGTGCTCGG GCGCATCGAC
ATCCGCGCCC CGCGCTCCGG CACGGTGCAG AACATCAACG CCCGCGCCTA CACGGTCGGC
GCGGTGGCGC GGGCTGGCGA CACGCTGCTG GAGATCGTGC CCCTGGACGA GCCTTTGGTG
GTGGATGCCC AGGTGCCGGT GCAGGACATC GACCGGCTCA AGAAGGACGA TGCGGTGGAG
GTGCGCTTCC CCGCCTTCCA CGATCGCACC ACCCCCATGG TGATGGGCAG GCTCAAGACC
GTCTCGCGCG ACCGGCTGGT GGACGAGACC ACCCACCAGC CCTACTTCCT CGCCCGGGTG
GCTGTGGCCG AGACCGACAT TCCCCCGGCC CTGAAACAGC GCCTCGTGCC CGGCATGAAT
GCGGAAGTCG CCTTCTATGT GGGCGAGCGC TCCGTCCTGA GCTATCTGGT GCGTCCCATC
ACCGATGCCT TCTCCCGCGC CTTCACGGAG CGCTGA
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| Protein sequence | MRFLESWFSP RAALAGADMG AAAGVRPTTP APPTAPGAPP PPSGDYNAMA RIGYAVIAFT
FLGVSGWAAL ARVDSAVIAP GVVAVESKRQ VVQHLEGGIV AEILVKEGEE VVKDQVLFRL
DPTQSKASDD AALAQLRAAL ALEARLIAER DEREQIVFPD DLLANAGQPV VRDAMADQLT
QFRDRRAAFK SQTGILENRA EQSGHEIEGL TQERLSAEQQ LMFIDDELDS LRQLEQKRLV
NKSRVSQIER EKARLEGVVG RNTADTAKVR GSIGELTMQV SQLRQQRAED IGKQLLEVRQ
RIAELTEKVR VTRNVLGRID IRAPRSGTVQ NINARAYTVG AVARAGDTLL EIVPLDEPLV
VDAQVPVQDI DRLKKDDAVE VRFPAFHDRT TPMVMGRLKT VSRDRLVDET THQPYFLARV
AVAETDIPPA LKQRLVPGMN AEVAFYVGER SVLSYLVRPI TDAFSRAFTE R
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