| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1506 |
|---|
| Symbol | |
|---|
| ID | 5422148 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 1713773 |
|---|
| End bp | 1714795 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640880754 |
|---|
| Product | pyridoxal-5'-phosphate-dependent protein beta subunit |
|---|
| Protein accession | YP_001416411 |
|---|
| Protein GI | 154245453 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1171] Threonine dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.88993 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCATCTC AATCCGCACT GTTCTCCGTC ATTCCCGACA CTTCTCATGT ATTCGCCGCC
ACGATCGCTG ACGTTGAGGC AGCATATGAT CGTATTTCCG GGCAGGTCAT CCGCACCCCG
CTCTTCGAGA ATGCGGCCAT CAACGCGGCC TGCGGGGCAC GAATTCTCAT CAAGCCGGAA
ATGTTGCAGC ATACCGGCTC GTTCAAGTTC CGCGGTGCTT CCAATCGCGT GGCCCTGATG
AGCGCCGCCG AGCGGGCCGG CGGCATCGTC GCCTGGTCCT CGGGCAACCA TGCCCTCGCC
ATCTCGGCGG TGGCCGCGCG CCACGGCATC AAAGCCACCA TCCTGATGCC CTCCGACGCC
CCGCGCGCCA AGGTCGAGGG CGCCGAACGG CTCGGCGGCA CCGTGCGCCT CTATGACCGC
GCCACCGAAG TGCGCGAGGA GATCGGCGCC GACATCGCTG CCCGCACCGG CGCCGTCATC
ATCCCGCCTT ATGACGACCC CCACGTCATC GCCGGCCAGG GCACGGTGGG CCTGGAACTG
GCCGAGCAGG CGGCAGCCCT CGGCGCGCAG CTCGACATGG CCCTGTTCGC CTGTTCCGGC
GGCGGCCTGG TGGCGGGCGC CGCCACTGCC CTCAAGGCCC GCTCGCCGGC AACCCTGGTC
TATAGCGCCG AGCCCGCCGG CTTCGACGAC ACCGCCCGCT CGCTGGCCTC CGGCAAGCCG
GAGCGCAACG CGCCGGGCGC CACGACGCTG TGCGACGCCC TGATGGTGCC CACTCCCGGC
CTGCTCACCT TCCCCATCAA CCGCGCGCTG CTGGCGGGCG GCGTGGCGGT GACCGACGAC
GAAGTGAAGG CCGCCATGCG CCTCGTCTAT GACACGCTGA AGCTGGTGGT GGAGCCCGGC
GGCGTCACCC CGCTCGCCGC CGTGCTGGCG GGAAAGGTGG ACGCCAAGGG CAAGACCGTG
GGCGTCGTGC TCTCCGGTGG CAACGTGGAC CCCGACACCT ACGCCGCCTG CATCGGCGCC
TGA
|
|---|
| Protein sequence | MPSQSALFSV IPDTSHVFAA TIADVEAAYD RISGQVIRTP LFENAAINAA CGARILIKPE
MLQHTGSFKF RGASNRVALM SAAERAGGIV AWSSGNHALA ISAVAARHGI KATILMPSDA
PRAKVEGAER LGGTVRLYDR ATEVREEIGA DIAARTGAVI IPPYDDPHVI AGQGTVGLEL
AEQAAALGAQ LDMALFACSG GGLVAGAATA LKARSPATLV YSAEPAGFDD TARSLASGKP
ERNAPGATTL CDALMVPTPG LLTFPINRAL LAGGVAVTDD EVKAAMRLVY DTLKLVVEPG
GVTPLAAVLA GKVDAKGKTV GVVLSGGNVD PDTYAACIGA
|
|---|
| |