Gene Xaut_1473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_1473 
Symbol 
ID5421316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp1683651 
End bp1684820 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content73% 
IMG OID640880721 
Productmajor facilitator transporter 
Protein accessionYP_001416378 
Protein GI154245420 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCAT CTTCCGCCAG CGCCGAGGGC GCCGGCTTCG GACGCATCTT CGCCATGGCC 
GCCGCCGCCG GCGTGGCGGT GGCCAACATC TATTACAACC AGCCCATGCT CGCGGTGATG
GAGCGCGACC TGCCCGGTTC CCTCACCCCG CTGGTGCCTA CGGTGACGCA GATCGGCTAT
GCCGCCGGCC TGTTCCTGCT GGTGCCTTTG GGCGACGTGG TGGAGCGGCG ACGCCTCATC
GTGATCCAGT TCGTGGCGGT GGCGGCGGCG CTGGCCTTTT CCGCCCTGGC GCAGGGGCCG
CTGGCGCTGC TTGCCGCCTC CTTGCTGGTG GGCCTCGGCT CCACGGTGGC TCAGCAGATC
GTGCCTTTGG CGGCCCATCT CGCCGCGCCG GAGAAGCGCG GCGCCACGGT GGGCATGGTG
CTGTCGGGCA TCCTCGCCGG CATCCTGCTC AGCCGCACCC TGTCCGGCTT CGTCGCCGCC
CATGCGGGCT GGCGCGACAT GTTCTGGCTG GGGGTGCCTA TGGCATTGCT CGCCGGCGGG
CTGATGGCAC TGACCCTGCC CCGCAGCATG CCCGAGACCA GCCTGTCCTA CGGCCGCCTC
CTGGGGTCGC TCGGCGCCCT GTGGCGCGAG TTTCCCACCC TGCGCCGGGC CGCCATTACC
CAGGCACTCA TCTTCGCCGC CTTCATCGCC TTCTGGACCA TCCTCGCCTT CCGGCTGGAG
GGGCCGCCGT TCCACCTCGG CGCGCAGGCG GCGGGGCTGT TCGGCATCCT CGGCCTCGTG
GGCATCCTGG CCGCGCCCCT GTCCGGCCGC TTCGCCGACC GCAAGGGCCC CGGGAGCGTG
GTGCTCTGGG GCGCCGGCCT CGCCCTGGCG GCATGGCTCG TCTTCTTCGC CTGGCCCAGC
ATCGCCGGCA TGGTGGTGGG CGTCATCGTG CTGGACTTCG CCATGCAGGG CGCGCTGGTG
GCCAACCAGC ACATCGTGTT CGCGCTGCGG CCGGCCGCCC GGGCGCGGCT GAACACCATC
CTGATCGGCA CCATGTTCGT CGGCGGGGCG CTGGGCTCAG CGGCGGCCAC GCTCGCCTGG
GGCTTCGGCG GCTGGCCGGC GGTGTGCGCG GCGGGACTTG GCTGCGGCGC CCTCGCTCTC
GCCATCCAGG CCCTGGGCCG CAGGGGCTGA
 
Protein sequence
MTSSSASAEG AGFGRIFAMA AAAGVAVANI YYNQPMLAVM ERDLPGSLTP LVPTVTQIGY 
AAGLFLLVPL GDVVERRRLI VIQFVAVAAA LAFSALAQGP LALLAASLLV GLGSTVAQQI
VPLAAHLAAP EKRGATVGMV LSGILAGILL SRTLSGFVAA HAGWRDMFWL GVPMALLAGG
LMALTLPRSM PETSLSYGRL LGSLGALWRE FPTLRRAAIT QALIFAAFIA FWTILAFRLE
GPPFHLGAQA AGLFGILGLV GILAAPLSGR FADRKGPGSV VLWGAGLALA AWLVFFAWPS
IAGMVVGVIV LDFAMQGALV ANQHIVFALR PAARARLNTI LIGTMFVGGA LGSAAATLAW
GFGGWPAVCA AGLGCGALAL AIQALGRRG