Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_1471 |
Symbol | |
ID | 5420780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | - |
Start bp | 1681516 |
End bp | 1682562 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640880719 |
Product | putative mRNA 3-end processing factor |
Protein accession | YP_001416376 |
Protein GI | 154245418 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCCGG AAGACCTGCT CTGCCCCTCG CCCAAGGGCC TTTATTCCCC CGCCGGCGAC TTCTATGTGG ACCCGACGCG CGCCGTGTCG CGGGCGGTGA TTACCCATGG CCATTCGGAC CATGCCCGCG CCGGCCATGC CCATGTGCTC GCCACCCGGC AGACGCTCGA CCTCATGGCC ATCCGCTACA GCGAAGGCTT CGCCGGTTCG ACCCAGGCGC TGGCCTATGG CGAGGCGGTG GTCATCAACG GCGTGCGCGT CAGCCTGCAT CCCGCCGGCC ACGTGCTCGG CTCGGCCCAG GTCCGGCTGG AGAAGGACGG GCTCGTGATC GTGGTCTCCG GCGACTACAA GGACGCCGCC GACCCTACCT GCGCCCCGTT CGAGCCGGTG CGCTGCCACG TCTTCGTCAG CGAGGCGACC TTTGGCCTGC CGGTGTTCCG CCATCCCCCG GCGGCGGGCG AGACCGAGAA GCTGCTCGCC TCCGTGCGCA TCTTCCCCGA GCGCACCCAC ATCGTGGGCG CCTATTCGCT CGGCAAAGCC CAGCGCATGA TGGCGCTGAT GCGCGCCGCC GGCCACGACG CGCCGATCTA TGTGCATGGC GCGCTCACCG CCATCACCGA TTATTATGAG GCTCAGGGCC TGGCGCTGGG CGACATCCGC CCGGTGAAGG GCACCGACAA GGCCGCCTTC GCCGGGGCGG TGGTGATCGC CCCGCCCTCC GCAATGACCG ACATCTGGGC GCGGCGCTTC GCCGATCCCA TCACCTGCTT CGCCTCCGGC TGGATGCGGG TGCGCGCCCG GGCCCGCCAG CGCGGCGTGG AGCTGCCGCT GGTAGTGTCC GACCATGCGG ACTGGGACGG GCTCTGCGCC TCCATCCAGG CCACCGGCTG CGAGGAGCTG TGGGTGACCC ACGGCGCTGA GGACGCTTTG GTCCACTGGG CCCAGACCCG CCAATTGCGT GCCCGCCCGC TCCACATGGT GGGCTATGGC GAGGAGGACG AGGAGGCGGC TCCCACTGAA GGCGCAGCGC CGGGGGCTGC GCCATGA
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Protein sequence | MRPEDLLCPS PKGLYSPAGD FYVDPTRAVS RAVITHGHSD HARAGHAHVL ATRQTLDLMA IRYSEGFAGS TQALAYGEAV VINGVRVSLH PAGHVLGSAQ VRLEKDGLVI VVSGDYKDAA DPTCAPFEPV RCHVFVSEAT FGLPVFRHPP AAGETEKLLA SVRIFPERTH IVGAYSLGKA QRMMALMRAA GHDAPIYVHG ALTAITDYYE AQGLALGDIR PVKGTDKAAF AGAVVIAPPS AMTDIWARRF ADPITCFASG WMRVRARARQ RGVELPLVVS DHADWDGLCA SIQATGCEEL WVTHGAEDAL VHWAQTRQLR ARPLHMVGYG EEDEEAAPTE GAAPGAAP
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