Gene Xaut_1440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_1440 
Symbol 
ID5425389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp1652344 
End bp1653489 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content73% 
IMG OID640880688 
Productbenzoate transporter 
Protein accessionYP_001416345 
Protein GI154245387 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3135] Uncharacterized protein involved in benzoate metabolism 
TIGRFAM ID[TIGR00843] benzoate transporter 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.517943 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGTCT CCGTCATCGT TTCCGCCTTC GTCGCGGCGC TCGTGGGATT CGGCGGAACC 
CTCGCCATCG TCCTCGCCGC CGCCGCCGCG GTGGGAGCGA GCCCCGCCGA AGCCTCCTCG
TGGGTGGCCG CTATCTGCCT CGCCATCGCT GCGACCTCCG CCTTTCTCTC CATCCGCTAC
CGCATGCCCA TCATCGCCGC GTGGTCCACG CCGGGGGCGG CGCTCATCGC CGGCTTCGGA
TCGGGAATCG GCATGGCCTC GGCCACCGGC GCCTTCCTGG TCGCCGGCCT GCTGGTGGTG
CTGTGCGCGG CGATCAAGCC CCTCGGCACG CTGGTCGGGC GCATTCCGGT AGCGGTGGCA
GCCGCCATGC TGGCCGGCGT GCTGGTCCGG TTCGTCATGG CCCTCGCCGA GCATGCGGCG
GCATCGCCGG CCCTGGTGCT GCCGGTGATC GCAGTTTTCT TCATCGTGCG GGTTCTGTCG
CCCAACTGGG CGGTGCCGGC GGCGCTGGTG GTGGGCGGAG CGGGGGCCGT CCTGCTGGGT
CGGGTGGGAC CCATGCCGGA GTTCGAGCTC TCGGCCCTGG TGTGGACCAC ACCGCGCTTC
GAGCCCCCGG TTCTGGTGGG GCTGGGCCTG CCCCTGTTCC TCGTCACCAT GGCGTCGCAG
AACCTGCCCG GCTTCGCGGT GCTGCGCGCA TGCGGCTATG TGCCTCCGGT GCGGCCTATC
CTCGCCGTCA CCGGCCTTGC CTCCATGGCG AGCGCGCCCT TCGGTGCCCA CGCCACCAAT
CTTGCCGCCA TCGCCGCCGC TTTGTGCACC GGGCCGGAGA CTCACCCCGA TCCCAGGCGG
CGCTGGCTGG CTGGGCCGGT CTATGCCGGC TTCTACCTGC TGCTGGCGGC CGCCGGCGCC
TCACTGGTGG GGGTGTTCGC GGCCCTGCCG CCCGCCCTCA TCGCCACCAT CGCCGGCCTC
GCCCTGCTCT CAGCGCTAAC CGGCGCGCTG ACGGCAGCGC TGAACGAGGA CAGGCACCGG
GTGGCGGCGG TGGCCACCTT CGCCACCACC GCCTCGGGGG TCACGGCCCT CGGCCTCGGG
GCGCCGGTGT GGGGGCTGGC GGCGGGGCTT CTCATCGTCG GCCTCGACCG GCTGCGGCGG
AACTGA
 
Protein sequence
MRVSVIVSAF VAALVGFGGT LAIVLAAAAA VGASPAEASS WVAAICLAIA ATSAFLSIRY 
RMPIIAAWST PGAALIAGFG SGIGMASATG AFLVAGLLVV LCAAIKPLGT LVGRIPVAVA
AAMLAGVLVR FVMALAEHAA ASPALVLPVI AVFFIVRVLS PNWAVPAALV VGGAGAVLLG
RVGPMPEFEL SALVWTTPRF EPPVLVGLGL PLFLVTMASQ NLPGFAVLRA CGYVPPVRPI
LAVTGLASMA SAPFGAHATN LAAIAAALCT GPETHPDPRR RWLAGPVYAG FYLLLAAAGA
SLVGVFAALP PALIATIAGL ALLSALTGAL TAALNEDRHR VAAVATFATT ASGVTALGLG
APVWGLAAGL LIVGLDRLRR N