Gene Xaut_1439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_1439 
Symbol 
ID5425388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp1651249 
End bp1652241 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content66% 
IMG OID640880687 
Productinner-membrane translocator 
Protein accessionYP_001416344 
Protein GI154245386 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.674436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.355177 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCT CCACCCCCGC CCATCCCGCC GGTGCGCCCG CGGCCTCCGG CTCCGGCGCC 
AGCGCCGGCA CCATCTTCGG CATCCTCGCC ATCGCGGTGC TGCTGGCGGC GCCGTTCGGC
GTCTACCCCG TGTTCCTCAT GAAGGTGATG TGCTTCGCGT TGTTCGCGTG CGCCTTCAAC
CTGCTTCTGG GCTACACGGG CCTGCTCTCG TTCGGCCACG CCATGTTCTT CGGCGGGTCG
GCCTATGTGT GCGCCCACAC CATCAAGGTG ATGGGCTTCA CCCCGGAGCT GGGCATCCTT
GCCGGCGTCG TCTTCGCCGC CATGCTGGGT TTCATCTCCG GCCTGCTCGC CATCCGCCGC
CAGGGCATCT ATTTCGCCAT GGTGACGCTG GCGCTGGCGC AGATGTTCTT CTTCTTCTGC
CTCCAGGCCC GCTTCACCGG CGGCGAGGAC GGCCTTCAGG CGGTGCCGCG CGGGGCGCTG
TTCGGCCTCA TCGACCTGTC GAAGGATATC AACCTCTACT ACCTGGTGCT GGCCATCTTC
GTGTTCGGCT TCCTGGTCAT CTACCGGGCG ATCCACTCGC CGTTCGGTCA GGTGCTGAAG
GCCATCCGCG AGAACGAGCC GCGCGCTATC TCTCTGGGCT ACCGGGTGAA CCAGTACAAG
CTGCTCGCCT TCGTGCTGTC GGCGGCGCTG GCCGGCCTTG CGGGAGCGAC CAAGGTGCTG
GTGTTCCAGC TCGCCTCGCT CACAGACGTG GCCTGGCAGA TGTCGGGCGA GGTGATCCTG
ATGACGCTGG TGGGCGGCAT GGGCACCATC CTCGGCCCCA TCGTTGGCGC GGCGGTGATC
GTGACCATGC AGAACTACCT CGCCGGCCTC GGCGAATGGG TGCTGGTGAT CCAGGGCGTC
ATCTTCGTCC TCGCCGTCTC CCTGTTCCGC AGAGGCTTCG TCGGCGAGGT CATCGCCATC
ATCCAGCAGT TCAAGGCCAA GAAGGCAGGC TGA
 
Protein sequence
MSTSTPAHPA GAPAASGSGA SAGTIFGILA IAVLLAAPFG VYPVFLMKVM CFALFACAFN 
LLLGYTGLLS FGHAMFFGGS AYVCAHTIKV MGFTPELGIL AGVVFAAMLG FISGLLAIRR
QGIYFAMVTL ALAQMFFFFC LQARFTGGED GLQAVPRGAL FGLIDLSKDI NLYYLVLAIF
VFGFLVIYRA IHSPFGQVLK AIRENEPRAI SLGYRVNQYK LLAFVLSAAL AGLAGATKVL
VFQLASLTDV AWQMSGEVIL MTLVGGMGTI LGPIVGAAVI VTMQNYLAGL GEWVLVIQGV
IFVLAVSLFR RGFVGEVIAI IQQFKAKKAG