| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1433 |
|---|
| Symbol | |
|---|
| ID | 5423501 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 1645996 |
|---|
| End bp | 1646634 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640880681 |
|---|
| Product | uncharacterized peroxidase-related enzyme |
|---|
| Protein accession | YP_001416338 |
|---|
| Protein GI | 154245380 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2128] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR01926] uncharacterized peroxidase-related enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.310818 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGGCGGG CGTCGAAAAC GCCGGTCGCG AAGGCCGTGG CGCCCGCTCC GGCGCGGGTG
CGGGACGACC TTCCGGCCAT CGCGCTTCCG CTGTCGCCGG CGGAGCTTGA TCCTGCCAAC
CGGGCGTATT TTGACAAGTG CCTGGAGAAG ATCGGCTTCG TTCCGAACGT GCTTCAGGCC
TATGCGTTCG ACATGGCGAA GCTTTCGGCC TTCGCGGCCA TGTACAACGA CCTGATGCTC
GCGCCGTCCG GCCTCTCAAA GTTGGAACGG GAGATGATCG CGGTGGTCGT GTCCGCCGTG
AACCGCTGTT ACTACTGTCT CACTGCCCAC GGTGCGGCGG TGCGCCAGCT GTCCGGCGAT
CCCATCCTGG GCGAGCAACT CGTGATGAAT TATCGCGCCG CAAGGCTCGA TCCCCGCCGG
CGCGCCATGC TCGACTTCGC CGCCAAGCTC ACCGAACGCC CCAATGAGGT GGAGGAGGAG
GACCGCGAGG CCCTGCGCCG CGTCGGTCTC TCGGAGCGGG ACATCTGGGA TGTCTCGGCG
GTGGTGGGCT TCTTCAACAT GTCGAACCGA ATCGCCTCGG CCACCGACAT GCGCCCCAAC
GAGGCCTACC ACGCCCAGGC CCGCACCCTG CCGGAGTGA
|
|---|
| Protein sequence | MRRASKTPVA KAVAPAPARV RDDLPAIALP LSPAELDPAN RAYFDKCLEK IGFVPNVLQA
YAFDMAKLSA FAAMYNDLML APSGLSKLER EMIAVVVSAV NRCYYCLTAH GAAVRQLSGD
PILGEQLVMN YRAARLDPRR RAMLDFAAKL TERPNEVEEE DREALRRVGL SERDIWDVSA
VVGFFNMSNR IASATDMRPN EAYHAQARTL PE
|
|---|
| |