Gene Xaut_1369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_1369 
Symbol 
ID5425417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp1571844 
End bp1573097 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content69% 
IMG OID640880617 
Productmajor facilitator transporter 
Protein accessionYP_001416274 
Protein GI154245316 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.919983 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCCA CGTCCTCGGT GCCGGCGCCT CCCGGCGCGC GGCGCGCGCT TCCGGCCATG 
CTTATCCTGG TCGCCGGCTG CGTCATCGCT CTTATCACCT TCGGCCCGCG CTCGGTGTTC
GGCCTTTTCC TGCTGCCCAT GTCGCAGGAA TTCGGCTGGG GCCGTGACGT ATTCGGCCTC
GCGGTGGCGC TGCAGAACCT GCTCTGGGGC CTCGGCTCGC CGTTCGCCGG CGCCATCGCC
GATCGCTTCG GCACCGTGCG GGTGATGTGC TGCGGCGCGC TGCTCTATGC CGCCGGCCTG
GTGCTGATGT CCTATGCCAC CACCCCCGGC ATGCTGCACC TAACCGCCGG CATCATGGTG
GGCTTCGGCC TGTCCGCCGC CTCGTTCAAC CTGGTGCTGG CCGCCTTCGG CAAGCTCCTG
CCCGACCAAT GGAAGTCCAT CGGCTTCGGC GCGGCGACGG CGGCGGGCTC GTTCGGCCAA
TTCCTGTTCC CGCCCCTCAG CCGCGCGCTG ATGGACACCA TCGGCTGGCA CGAGACGCTG
ATCGTGTTCG GGGCCGCGCT GCTCATCGTC ATGCCGTTCT CGCTGGCGCT GGCCACCCGC
GGCGTGGCTG CGGCGAAGCC GGGCGCGGCC GCAGCGGCAC CGCAGCAGGG CATCGGCGCC
GCCATCGGCG AGGCGCTGCG CCACCCGAGC TACGTGATGC TGGTTCTTGG TTTCTTCACC
TGCGGCTTCC AGCTCGCCTT CATCACCGTG CACATGCCGG CCTTCCTGGT GGACAACGGC
GTGAGCCTGT CGGTGGGCGC CTACACGCTG GCGCTGATCG GCCTGTTCAA CATCCTCGGC
TCGCTCACGG CGGGTTACCT GTCCAGCCGG GTGTCGCGCA AGTGGCTGCT GGCGTGGATC
TATGCCGGGC GGGGCGTGGC CATCGCCGCG TTCGTGCTGC TGCCCATCAC CCCGCTGAGC
TGCTACGTGT TCGGCGCGGC CATGGGCTTC CTGTGGCTCT CCACCGTGCC GCCCACCTCG
GGCCTGGTTA TGTTGATGTT CGGCACCCGC TACATGGCCA TGCTGTACGG CTTCGCCTTC
TTCTCCCACC AGGTGGGCGG CTTCCTCGGC GTGTGGCTGG GCGGCATGCT CTATGTGGCG
ACCGGTTCTT ACAGCTGGGT GTGGTGGCTG TCGGTGGCGC TGTCGTTCGC CTCCGCCGCC
ATCAACCTGC CGATCAAGGA GCGCCCGGTG GTGCGGGTGC CTGTGGCGGC TTAG
 
Protein sequence
MSATSSVPAP PGARRALPAM LILVAGCVIA LITFGPRSVF GLFLLPMSQE FGWGRDVFGL 
AVALQNLLWG LGSPFAGAIA DRFGTVRVMC CGALLYAAGL VLMSYATTPG MLHLTAGIMV
GFGLSAASFN LVLAAFGKLL PDQWKSIGFG AATAAGSFGQ FLFPPLSRAL MDTIGWHETL
IVFGAALLIV MPFSLALATR GVAAAKPGAA AAAPQQGIGA AIGEALRHPS YVMLVLGFFT
CGFQLAFITV HMPAFLVDNG VSLSVGAYTL ALIGLFNILG SLTAGYLSSR VSRKWLLAWI
YAGRGVAIAA FVLLPITPLS CYVFGAAMGF LWLSTVPPTS GLVMLMFGTR YMAMLYGFAF
FSHQVGGFLG VWLGGMLYVA TGSYSWVWWL SVALSFASAA INLPIKERPV VRVPVAA