| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1348 |
|---|
| Symbol | |
|---|
| ID | 5422309 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 1549506 |
|---|
| End bp | 1550336 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640880596 |
|---|
| Product | HpcH/HpaI aldolase |
|---|
| Protein accession | YP_001416253 |
|---|
| Protein GI | 154245295 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2301] Citrate lyase beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAGT TTGCCCGGCC CGTTTCGCTC AGGAGCGGGC GGCTCGTTGC CCTGTTTGTC
CCGGCGACGC GTCCCGATCG CTTCGCCAAA GCGCTCGCCT CCGGCGCCGA CGCCATCATC
ATCGACCTCG AGGATGCGGT GGGCCACGCA GAGAAGGATG CCGCCCGCGA TGCCCTCGCC
GCCGCCATCC CGGCCGGAGG ACCGGTGCTG CTGCGAATCA ACGCCTCTGG CACCCCGTGG
CACGCGGAGG ATCTCGCCGT CGCGCGGCGG CTGCCCCTTG CCGGCGTCAT GCTGCCGAAG
GCCGAGAGCC GGGACGAGGT GGAGCAGGTG GCCGCCCGCC TCGGCGAGGG CGTTGCCCTC
ATTCCCCTCA TCGAAAGCGC CCGGGGCCTT GCCGCGGCGC GGTCCATCGC GGCGGTGCCG
TGCGTAGCCC GCCTCGCCTT CGGCTCCATC GATTTCGCCG CTGATCTGGG CTGTGCCCAT
ACCCGCGAGG CGCTCCTTTC CGCCCGTTCC GAGCTGGTGC TGGCGGCGCG GCTCGCCGGC
GGTCAGGGCC CCATGGACGG GGTCACCACC CGCGTCGACA ACCCCGCCCT CGCGCAGGAC
GACGCGGCCC ATGCGGTGGC CCTCGGCTTC GCCGGCAAGC TGTGCATCCA CCCCGGCCAG
ATCGCCCCCG TGATGACAGG CTTTGCGCCG ACCGCCGAAG AGGTGAGCTG GGCCGAGCGC
ATCCTCGCCG CCCTAGACGC GGGCGGTTCG GTCGTGACGG TGGACGGCGC CATGGTGGAC
GCCCCCGTGC GCCTGCGCGC CGAGCGCATC CTAGCCCGCA CAGGCCGCTG A
|
|---|
| Protein sequence | MSEFARPVSL RSGRLVALFV PATRPDRFAK ALASGADAII IDLEDAVGHA EKDAARDALA
AAIPAGGPVL LRINASGTPW HAEDLAVARR LPLAGVMLPK AESRDEVEQV AARLGEGVAL
IPLIESARGL AAARSIAAVP CVARLAFGSI DFAADLGCAH TREALLSARS ELVLAARLAG
GQGPMDGVTT RVDNPALAQD DAAHAVALGF AGKLCIHPGQ IAPVMTGFAP TAEEVSWAER
ILAALDAGGS VVTVDGAMVD APVRLRAERI LARTGR
|
|---|
| |